RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 BSCL2Q96G97 398 aaPredicted RBP9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 SMPD3Q9NY59 655 aaPredicted RBP9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 KLK9Q9UKQ9 250 aa9.79□□□□□ -0.84
CSNK1D-213ENST00000580446 KBTBD11O94819 623 aa9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 IFNA5P01569 189 aa9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 PRB4P10163 310 aaPredicted RBP9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 ASIPP42127 132 aa9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 GBX2P52951 348 aaPredicted RBP9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 TMED1Q13445 227 aa9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 UHRF2Q96PU4 802 aa9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 Q9H8V8 135 aa9.78□□□□□ -0.84
CSNK1D-213ENST00000580446 A0A0A6YYD4 124 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 ST8SIA3O43173 380 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 FXYD7P58549 80 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 Q56UQ5 140 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 IGSF11Q5DX21 431 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 SSX7Q7RTT5 188 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 GGHQ92820 318 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 Q9N2K0 584 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 IMPAD1Q9NX62 359 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 ZNF586Q9NXT0 402 aa9.77□□□□□ -0.85
CSNK1D-213ENST00000580446 IGLC7A0M8Q6 106 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 FKBP6O75344 327 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 CCL18P55774 89 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 LINC00315P59091 139 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 IRF3Q14653 427 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 LRRTM1Q86UE6 522 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 SYS1Q8N2H4 156 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 STXBP6Q8NFX7 210 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 OR10W1Q8NGF6 305 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 TMEM167AQ8TBQ9 72 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 CIB1Q99828 191 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 TAGLN3Q9UI15 199 aa9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 RBM7Q9Y580 266 aaKnown RBP9.76□□□□□ -0.85
CSNK1D-213ENST00000580446 TRAV14DV4A0A0A6YYC5 116 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 RPL30P62888 115 aaKnown RBP9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 TPBGQ13641 420 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 ATP6AP1Q15904 470 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 GSG1LQ6UXU4 331 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 PLEKHJ1Q9NW61 149 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 ERVK13-1Q9NX77 482 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 C21orf62Q9NYP8 219 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 YTHDF2Q9Y5A9 579 aaKnown RBP9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 FAT3Q8TDW7 4589 aa9.75□□□□□ -0.85
CSNK1D-213ENST00000580446 CTSGP08311 255 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 DAD1P61803 113 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 ARFRP1Q13795 201 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 SLC25A24Q6NUK1 477 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 SPSB3Q6PJ21 355 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 VN1R17PQ8TDU5 208 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 SCARB1Q8WTV0 552 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 MAFIPQ8WZ33 124 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 Q9H3A6 140 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 CKLFQ9UBR5 152 aa9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 EXOGQ9Y2C4 368 aaKnown RBP9.74□□□□□ -0.85
CSNK1D-213ENST00000580446 TRBV6-6A0A0A6YYG2 114 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 TRDCB7Z8K6 153 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 SOCS1O15524 211 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 HLA-GP17693 338 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 TTC32Q5I0X7 151 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 KDM4DQ6B0I6 523 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 PUSL1Q8N0Z8 303 aaKnown RBP9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 CBR4Q8N4T8 237 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 RIMS4Q9H426 269 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 AMBNQ9NP70 447 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 TNFRSF18Q9Y5U5 241 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 RFNGQ9Y644 331 aa9.73□□□□□ -0.85
CSNK1D-213ENST00000580446 TRAV3A0A0B4J244 114 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 A0A1W2PPQ1 181 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 TMEM189A5PLL7 270 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 ZNF705FA8MVS1 300 aaPredicted RBP9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 K7EQG2 157 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 IGHV3-48P01763 117 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 ZNF705DP0CH99 300 aaPredicted RBP9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 ZNF705BP0CI00 300 aaPredicted RBP9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 GCSHP23434 173 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 ERVFC1-1P60608 527 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 RPL8P62917 257 aaKnown RBP9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 UNC119Q13432 240 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 CLINT1Q14677 625 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 USF2Q15853 346 aaPredicted RBP9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 HSP90B2PQ58FF3 399 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 TMEM69Q5SWH9 247 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 ZNF705AQ6ZN79 300 aaPredicted RBP9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 KCTD9Q7L273 389 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 SPATA24Q86W54 205 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 ZFP41Q8N8Y5 198 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 RNF141Q8WVD5 230 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 MRPL48Q96GC5 212 aaKnown RBP9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 ADTRPQ96IZ2 230 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 OR10C1Q96KK4 312 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 GPHA2Q96T91 129 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 FAM107BQ9H098 131 aa9.72□□□□□ -0.85
CSNK1D-213ENST00000580446 TRBV5-5A0A0J9YX44 114 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 F5H768 121 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms