RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 MARCOQ9UEW3 520 aaPredicted RBP5.13□□□□□ -1.59
COPS3-216ENST00000579716 TPRKBQ9Y3C4 175 aa5.13□□□□□ -1.59
COPS3-216ENST00000579716 PYGO1Q9Y3Y4 419 aa5.13□□□□□ -1.59
COPS3-216ENST00000579716 KIF13BQ9NQT8 1826 aa5.13□□□□□ -1.59
COPS3-216ENST00000579716 MYH4Q9Y623 1939 aa5.13□□□□□ -1.59
COPS3-216ENST00000579716 LRRC7Q96NW7 1537 aa5.13□□□□□ -1.59
COPS3-216ENST00000579716 CAMTA1Q9Y6Y1 1673 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 ADAMTSL1Q8N6G6 1762 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 IGKV1D-8A0A087WSZ0 117 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 OR2T8A6NH00 312 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 TMEM262E9PQX1 116 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 K7EP34 96 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 GSTZ1O43708 216 aaPredicted RBP5.12□□□□□ -1.59
COPS3-216ENST00000579716 CTSEP14091 401 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 SRP14P37108 136 aaKnown RBP5.12□□□□□ -1.59
COPS3-216ENST00000579716 GFERP55789 205 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 RPS11P62280 158 aaKnown RBP eCLIP5.12□□□□□ -1.59
COPS3-216ENST00000579716 HERVK_113P63121 156 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 AADACL3Q5VUY0 350 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 ACP7Q6ZNF0 438 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 TEX43Q6ZNM6 134 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 Q6ZUT4 128 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 RAB42Q8N4Z0 105 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 SGMS2Q8NHU3 365 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 LMX1AQ8TE12 382 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 LRRC29Q8WV35 223 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 TWIST2Q8WVJ9 160 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 COPS9Q8WXC6 57 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 POP5Q969H6 163 aaKnown RBP5.12□□□□□ -1.59
COPS3-216ENST00000579716 ELSPBP1Q96BH3 223 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 PEBP4Q96S96 227 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 AICDAQ9GZX7 198 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 DEFB127Q9H1M4 99 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 TMEM106BQ9NUM4 274 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 ANAPC10Q9UM13 185 aa5.12□□□□□ -1.59
COPS3-216ENST00000579716 ARRDC5A6NEK1 342 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 E9PLD3 99 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 F5H5P2 479 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 CD5LO43866 347 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 NGFP01138 241 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 MT-ND6P03923 174 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 HOXA4Q00056 320 aaPredicted RBP5.11□□□□□ -1.59
COPS3-216ENST00000579716 ATP5G2Q06055 141 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 ZNF880Q6PDB4 577 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 RPS19BP1Q86WX3 136 aaKnown RBP5.11□□□□□ -1.59
COPS3-216ENST00000579716 MSRB3Q8IXL7 192 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 C10orf126Q8N4M7 172 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 C9orf106Q8NAJ2 232 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 OR51H1Q8NH63 302 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 ATP6V0E2Q8NHE4 81 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 KCNS1Q96KK3 526 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 AQP10Q96PS8 301 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 GPX7Q96SL4 187 aaPredicted RBP5.11□□□□□ -1.59
COPS3-216ENST00000579716 NAA60Q9H7X0 242 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 MTFP1Q9UDX5 166 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 ENPP4Q9Y6X5 453 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 COL1A2P08123 1366 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 ABCA3Q99758 1704 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 OTOFQ9HC10 1997 aa5.11□□□□□ -1.59
COPS3-216ENST00000579716 TRAV27A0A087WT01 109 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 TRAV8-3A0A0A6YYJ7 113 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 IGLV1-36A0A0B4J1U3 117 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 CCL15-CCL14A0A0B4J2E2 113 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 TRBV7-6A0A0J9YX20 115 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 FAM236AA0A1B0GUQ0 79 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 FAM236BA0A1B0GV22 79 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 SMIM35A0A1B0GVV1 85 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 RBMY1BA6NDE4 496 aaKnown RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 RBMY1EA6NEQ0 496 aaKnown RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 TLCD2A6NGC4 264 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 GEMIN2O14893 280 aaKnown RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 UQCRQO14949 82 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 IGHG1P01857 330 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 RBMY1DP0C7P1 496 aaKnown RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 RBMY1A1P0DJD3 496 aaKnown RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 GNLYP22749 145 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 SDC2P34741 201 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 OPRM1P35372 400 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 RPL34P49207 117 aaKnown RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 FOXA3P55318 350 aaPredicted RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 RPS23P62266 143 aaKnown RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 ZNF90Q03938 601 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 DIP2AQ14689 1571 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 HES3Q5TGS1 186 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 DNAJC24Q6P3W2 148 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 SLC25A26Q70HW3 274 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 NOTCH2NLQ7Z3S9 236 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 TRAPPC6BQ86SZ2 158 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 SAXO1Q8IYX7 474 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 LINC00471Q8N535 108 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 ZNF709Q8N972 641 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 NEUROG1Q92886 237 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 TSLPQ969D9 159 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 GNPNAT1Q96EK6 184 aaPredicted RBP5.1□□□□□ -1.59
COPS3-216ENST00000579716 PGLYRP4Q96LB8 373 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 PLIN4Q96Q06 1357 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 SPACA5Q96QH8 159 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 NPVFQ9HCQ7 196 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms