RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SPNP16150 400 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 PSMB8P28062 276 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 LGALS7P47929 136 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 ARHGDIBP52566 201 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 PIGPP57054 158 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TAS2R31P59538 309 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 HERV-K104P61576 105 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 CD83Q01151 205 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM187Q14656 261 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF846Q147U1 533 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 MMDQ15546 238 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 PRSS8Q16651 343 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 IZUMO4Q1ZYL8 232 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 ANKRD55Q3KP44 614 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 SCGB2B2Q4G0G5 96 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 NMSQ5H8A3 153 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 PVRIGQ6DKI7 326 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 OR4A47Q6IF82 309 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 C11orf87Q6NUJ2 197 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 Q6ZRM9 215 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 SLC25A42Q86VD7 318 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 PPP1R27Q86WC6 154 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 SPAG16Q8N0X2 631 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 STPG2Q8N412 459 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TOMM5Q8N4H5 51 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 KLHDC1Q8N7A1 406 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TCTEX1D1Q8N7M0 179 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 LRTM2Q8N967 370 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TEX45Q8NA69 505 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 OR4F5Q8NH21 305 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 OR51H1Q8NH63 302 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 OR4S2Q8NH73 311 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TCTEX1D2Q8WW35 142 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM158Q8WZ71 300 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 FLYWCH2Q96CP2 140 aaKnown RBP2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 RHOVQ96L33 236 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 HARBI1Q96MB7 349 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM56Q96MV1 263 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 NOL4LQ96MY1 436 aaPredicted RBP2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 C7orf50Q9BRJ6 194 aaKnown RBP2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 WDR12Q9GZL7 423 aaKnown RBP2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 PRSS22Q9GZN4 317 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 NPFFR1Q9GZQ6 430 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM222Q9H0R3 208 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 OR51J1Q9H342 316 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 NAA60Q9H7X0 242 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF430Q9H8G1 570 aaPredicted RBP2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 RAB18Q9NP72 206 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 ABCB10Q9NRK6 738 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 BET1LQ9NYM9 111 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 METTL1Q9UBP6 276 aaKnown RBP2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 FLVCR2Q9UPI3 526 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM56-RWDD3S4R434 201 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 MGAM2Q2M2H8 2515 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 PRKDCP78527 4128 aaKnown RBP2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 NOTCH1P46531 2555 aa2.95□□□□□ -1.94
SMARCE1-215ENST00000578995 DNAH9Q9NYC9 4486 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TEX13DA0A0J9YY54 714 aaPredicted RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 C3orf85A0A1B0GTC6 90 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 A0A1B0GUS0 222 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 NAP1L6A6NFF2 107 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 MARCH11A6NNE9 402 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 C15orf61A6NNL5 157 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 RNF212BA8MTL3 300 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 H7C2Y5 167 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 UPK2O00526 184 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 PITX3O75364 302 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 PEX14O75381 377 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 HPRT1P00492 218 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 IGHG4P01861 327 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TCRBP04435 133 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 IFNA6P05013 189 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 OR5AC1P0C628 307 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 CD28P10747 220 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 ECI1P42126 302 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 KIR2DS2P43631 304 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 LPAR6P43657 344 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 MFAP2P55001 183 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 AP3S2P59780 193 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 OR2B8PP59922 312 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TSPAN5P62079 268 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 RPS16P62249 146 aaKnown RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 FOXL1Q12952 345 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 CATR1Q13166 79 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 PPP1R1AQ13522 171 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 HES1Q14469 280 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 RBMS2Q15434 407 aaKnown RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 RTL8BQ17RB0 113 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 BSXQ3C1V8 233 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 SP6Q3SY56 376 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 PDLIM3Q53GG5 364 aaPredicted RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 ANKRD39Q53RE8 183 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TRIQKQ629K1 86 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF57Q68EA5 555 aaPredicted RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 LIN54Q6MZP7 749 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 LPCAT3Q6P1A2 487 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF562Q6V9R5 426 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 C19orf35Q6ZS72 473 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 C18orf65Q6ZTR6 163 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 NRARPQ7Z6K4 114 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms