RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PPP1R2P1Q96PQ5 205 aa0.57□□□□□ -2.32
TOP2A-202ENST00000577541 NAT8Q9UHE5 227 aa0.57□□□□□ -2.32
TOP2A-202ENST00000577541 DICER1Q9UPY3 1922 aaKnown RBP0.57□□□□□ -2.32
TOP2A-202ENST00000577541 STRCQ7RTU9 1775 aa0.57□□□□□ -2.32
TOP2A-202ENST00000577541 GLI3P10071 1580 aa0.57□□□□□ -2.32
TOP2A-202ENST00000577541 MTUS2Q5JR59 1369 aa0.57□□□□□ -2.32
TOP2A-202ENST00000577541 CCDC88CQ9P219 2028 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 MAST2Q6P0Q8 1798 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 DISP1Q96F81 1524 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 FAM236DA0A1B0GTK5 79 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 C2orf74A8MZ97 194 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 EEF1E1-BLOC1S5C9J1V9 151 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 SSNA1O43805 119 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 NAPSAO96009 420 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 CALB1P05937 261 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 RPS17P08708 135 aaKnown RBP0.56□□□□□ -2.32
TOP2A-202ENST00000577541 OCM2P0CE71 109 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 FAM236CP0DP71 79 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 HIST1H1EP10412 219 aaKnown RBP0.56□□□□□ -2.32
TOP2A-202ENST00000577541 RAB13P51153 203 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 TPI1P60174 286 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 RAB5BP61020 215 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 RANP62826 216 aaKnown RBP0.56□□□□□ -2.32
TOP2A-202ENST00000577541 GNA12Q03113 381 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 PMAIP1Q13794 54 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 MOGQ16653 247 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 IMPG1Q17R60 797 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 FAM173BQ6P4H8 233 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 HIST2H3AQ71DI3 136 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 C1orf158Q8N1D5 194 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 SLC22A24Q8N4F4 322 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 OR52R1Q8NGF1 315 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 ANKRD7Q92527 254 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 SLC35B4Q969S0 331 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 TMEM222Q9H0R3 208 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 PARVGQ9HBI0 331 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 GPR84Q9NQS5 396 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 FUT9Q9Y231 359 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 ANGPT4Q9Y264 503 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 ROBO3Q96MS0 1386 aa0.56□□□□□ -2.32
TOP2A-202ENST00000577541 C9orf84Q5VXU9 1444 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
TOP2A-202ENST00000577541 MDC1Q14676 2089 aaKnown RBP0.55□□□□□ -2.32
TOP2A-202ENST00000577541 KIAA2026Q5HYC2 2103 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 TRAV38-1A0A0B4J264 116 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 IGHV1-18A0A0C4DH31 117 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 IGHV1-69-2A0A0G2JMI3 117 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 GGT3PA6NGU5 568 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 IBA57-AS1B1ANH7 110 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 FAAHO00519 579 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 SLC16A4O15374 487 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 AHSA1O95433 338 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 ISG15P05161 165 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 GPX2P18283 190 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 AP2S1P53680 142 aaPredicted RBP0.55□□□□□ -2.32
TOP2A-202ENST00000577541 OR4D2P58180 307 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 TAS2R20P59543 309 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 DEFA3P59666 94 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 ERHP84090 104 aaKnown RBP0.55□□□□□ -2.32
TOP2A-202ENST00000577541 HOXC5Q00444 222 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 SYPL2Q5VXT5 272 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 LPCAT4Q643R3 524 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 KTN1-AS1Q86SY8 53 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 SLC51BQ86UW2 128 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 COA5Q86WW8 74 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 DYNAPQ8N1N2 210 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 OR5J2Q8NH18 312 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 ARL5BQ96KC2 179 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 Q96M85 177 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 SPZ1Q9BXG8 430 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 OR51I2Q9H344 312 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 C11orf68Q9H3H3 251 aaKnown RBP0.55□□□□□ -2.32
TOP2A-202ENST00000577541 EFCAB1Q9HAE3 211 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 USE1Q9NZ43 259 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 MYO3BQ8WXR4 1341 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 LAMB2P55268 1798 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 CCDC144AA2RUR9 1427 aa0.55□□□□□ -2.32
TOP2A-202ENST00000577541 SMARCA4P51532 1647 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 IGHV3-64A0A075B6Q5 118 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 A0A0J9YW62 118 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 HMSDA8MTL9 139 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 DISC1C4P0D8 188 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 BUB1B-PAK6H3BSN5 160 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 H7C2G1 150 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 KLRC4O43908 158 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 KRT75O95678 551 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 TNNC2P02585 160 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 TCRBP04435 133 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 KRT7P08729 469 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 ZNF705DP0CH99 300 aaPredicted RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 ZNF705BP0CI00 300 aaPredicted RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 DDTP30046 118 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 S100A7P31151 101 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 RPL5P46777 297 aaKnown RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 CSN1S1P47710 185 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 UBE2IP63279 158 aaKnown RBP0.54□□□□□ -2.32
TOP2A-202ENST00000577541 RELAQ04206 551 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 FABP9Q0Z7S8 132 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 KCNJ8Q15842 424 aa0.54□□□□□ -2.32
TOP2A-202ENST00000577541 PABPC1L2AQ5JQF8 200 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms