RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 C14orf166Q9Y224 244 aaKnown RBP6.86□□□□□ -1.31
PRPF8-213ENST00000576407 KCNIP3Q9Y2W7 256 aa6.86□□□□□ -1.31
PRPF8-213ENST00000576407 TMED3Q9Y3Q3 217 aa6.86□□□□□ -1.31
PRPF8-213ENST00000576407 FN1P02751 2386 aaKnown RBP6.86□□□□□ -1.31
PRPF8-213ENST00000576407 FAM90A9PA6NNJ1 464 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 COLCA2A8K830 154 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 RNF212BA8MTL3 300 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 H3BUX3 64 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 MPPED1O15442 326 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 HOXA3O43365 443 aaPredicted RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 VENTXO95231 258 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 IGKV1D-33P01593 117 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 IGKV1-33P01594 117 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 IGHV4-59P01825 116 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 SNRNP70P08621 437 aaKnown RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 TPT1P13693 172 aaKnown RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 HIST1H1BP16401 226 aaKnown RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 CD1BP29016 333 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 S100A2P29034 98 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 S100GP29377 79 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 MC5RP33032 325 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 BRWD1-AS2P59051 145 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 RND3P61587 244 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 PJVKQ0ZLH3 352 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 CATR1Q13166 79 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 FBLN7Q53RD9 439 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 RBMS3Q6XE24 437 aaKnown RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 TMED4Q7Z7H5 227 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 TBC1D26Q86UD7 250 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 THNSL2Q86YJ6 484 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 ADAD2Q8NCV1 583 aaKnown RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 OR51H1Q8NH63 302 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 SSMEM1Q8WWF3 244 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 TMEM230Q96A57 120 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 NOL4LQ96MY1 436 aaPredicted RBP6.85□□□□□ -1.31
PRPF8-213ENST00000576407 NEU1Q99519 415 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 COMMD9Q9P000 198 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 FLVCR2Q9UPI3 526 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 WASHC3Q9Y3C0 194 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 MTORP42345 2549 aa6.85□□□□□ -1.31
PRPF8-213ENST00000576407 FXYD6-FXYD2A0A087WZ82 144 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 TEX13DA0A0J9YY54 714 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-213ENST00000576407 ARPC1BO15143 372 aaKnown RBP6.84□□□□□ -1.31
PRPF8-213ENST00000576407 FCGR3BO75015 233 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 APOA2P02652 100 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 IGKV1-16P04430 117 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 FAM106CPP0CH98 169 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 AKR1C4P17516 323 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 F2RP25116 425 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 EBI3Q14213 229 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 HES1Q14469 280 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 RHEBQ15382 184 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 RTL8BQ17RB0 113 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 PDPNQ86YL7 162 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 CCDC71LQ8N9Z2 235 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 OR5R1Q8NH85 324 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 ZNF418Q8TF45 676 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-213ENST00000576407 R3HDM4Q96D70 268 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-213ENST00000576407 TNFRSF19Q9NS68 423 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 SLC35D1Q9NTN3 355 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 LIN7CQ9NUP9 197 aaKnown RBP6.84□□□□□ -1.31
PRPF8-213ENST00000576407 UQCC1Q9NVA1 299 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 TNFSF18Q9UNG2 199 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 TCF19Q9Y242 345 aa6.84□□□□□ -1.31
PRPF8-213ENST00000576407 NIPBLQ6KC79 2804 aaeCLIP6.84□□□□□ -1.31
PRPF8-213ENST00000576407 C3orf85A0A1B0GTC6 90 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 A6NDX4 124 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 BTBD17A6NE02 478 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 DNAJC9-AS1A6NH13 148 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 CRYM-AS1A6NIL9 109 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 SEC14L6B5MCN3 397 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 HAX1O00165 279 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 RBFOX2O43251 390 aaKnown RBP eCLIP6.83□□□□□ -1.32
PRPF8-213ENST00000576407 RAMP3O60896 148 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 MOSP00540 346 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 HOXB5P09067 269 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 TMEM11P17152 192 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 HOXA5P20719 270 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 KIR2DS2P43631 304 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 CDX1P47902 265 aaPredicted RBP6.83□□□□□ -1.32
PRPF8-213ENST00000576407 HILS1P60008 231 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 DLK1P80370 383 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 CYCSP99999 105 aaKnown RBP6.83□□□□□ -1.32
PRPF8-213ENST00000576407 FABP9Q0Z7S8 132 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 GAGE1Q13065 139 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 SLC9A3R2Q15599 337 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 LY6EQ16553 131 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 KRTAP21-3Q3LHN1 58 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 TMEM128Q5BJH2 165 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 SLC16A13Q7RTY0 426 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 ZNF546Q86UE3 836 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 SLC25A42Q86VD7 318 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 TMEM219Q86XT9 240 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 SGPP2Q8IWX5 399 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 TMEM86BQ8N661 226 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 Q8N6K4 173 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 OR4C13Q8NGP0 309 aa6.83□□□□□ -1.32
PRPF8-213ENST00000576407 OR2T10Q8NGZ9 312 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms