RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 PCSK4Q6UW60 755 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 MUC15Q8N387 334 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 OR10AG1Q8NH19 301 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 FAM222BQ8WU58 562 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 CEP250Q9BV73 2442 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 IGKV1-27A0A075B6S5 117 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 DLL1O00548 723 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 APELAP0DMC3 54 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 GCSHP23434 173 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 GUCD1Q96NT3 240 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 PMCHL2Q9BQD1 86 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 SNHG12Q9BXW3 62 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 JPT1Q9UK76 154 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 TRPM7Q96QT4 1865 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 ORM1P02763 201 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 RBPJQ06330 500 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 RNASE7Q9H1E1 156 aaKnown RBP11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 OR2T8A6NH00 312 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 GRAMD2BQ96HH9 432 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 EAF1Q96JC9 268 aaPredicted RBP11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 HIGD1AQ9Y241 93 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 TRAV9-2A0A087WT02 112 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 SFTPCP11686 197 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 COX6A1P12074 109 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 IGFBP2P18065 325 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 RPL8P62917 257 aaKnown RBP11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 NEU1Q99519 415 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 MRPL32Q9BYC8 188 aaKnown RBP11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 CALYQ9NYX4 217 aa11.07□□□□□ -0.64
PCDHGB3-201ENST00000576222 PRRG2O14669 202 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 CLPSP04118 112 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 ARF6P62330 175 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 TBR1Q16650 682 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 ACSF3Q4G176 576 aaPredicted RBP11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 GCSAMLQ5JQS6 135 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 GCSAMQ8N6F7 178 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 SNRNP40Q96DI7 357 aaKnown RBP11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 PNRC2Q9NPJ4 139 aaKnown RBP11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 DOCK11Q5JSL3 2073 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 KIAA2026Q5HYC2 2103 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 ABCA7Q8IZY2 2146 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 CLDN18P56856 261 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 KRTCAP3Q53RY4 240 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 PLPPR1Q8TBJ4 325 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 WBP1Q96G27 269 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 TIMD4Q96H15 378 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 SLC25A33Q9BSK2 321 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 AP5S1Q9NUS5 200 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 PLXND1Q9Y4D7 1925 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 IZUMO1RA6ND01 250 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 CRYGSP22914 178 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 TIMP3P35625 211 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 SMRP1Q8NCR6 262 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 ANAPC10Q9UM13 185 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 WDR83OSQ9Y284 106 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 UFC1Q9Y3C8 167 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 SPTA1P02549 2419 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 NLRC5Q86WI3 1866 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 PRRX1P54821 245 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 SPEM2Q0P670 501 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 ZNF146Q15072 292 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 LINC00470Q9BZP3 86 aa11.06□□□□□ -0.64
PCDHGB3-201ENST00000576222 WNT9BO14905 357 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 PFN1P07737 140 aaKnown RBP11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 DCAF10Q5QP82 559 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 MIR17HGQ75NE6 70 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 BHLHA15Q7RTS1 189 aaPredicted RBP11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 LEAP2Q969E1 77 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 LPAR2Q9HBW0 351 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 TNFRSF19Q9NS68 423 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 ZNF581Q9P0T4 197 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 RFPL3SP0C7P2 107 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 LDLRAD2Q5SZI1 272 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 KLF14Q8TD94 323 aaPredicted RBP11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 HSPB7Q9UBY9 170 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 DOCK9Q9BZ29 2069 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 IGLV3-32A0A0A0MS00 114 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 TRAV24A0A0B4J272 114 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 A0A1W2PRS3 328 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 SNAI2O43623 268 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 GNG7O60262 68 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 MAFAQ8NHW3 353 aaPredicted RBP11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 CDX2Q99626 313 aaPredicted RBP11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 SCN5AQ14524 2016 aa11.05□□□□□ -0.64
PCDHGB3-201ENST00000576222 RAMP3O60896 148 aa11.04□□□□□ -0.64
PCDHGB3-201ENST00000576222 COX7A1P24310 79 aa11.04□□□□□ -0.64
PCDHGB3-201ENST00000576222 SRSF9Q13242 221 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCDHGB3-201ENST00000576222 RPL39P5Q59GN2 51 aa11.04□□□□□ -0.64
PCDHGB3-201ENST00000576222 MRPL52Q86TS9 123 aaKnown RBP11.04□□□□□ -0.64
PCDHGB3-201ENST00000576222 MYOZ3Q8TDC0 251 aa11.04□□□□□ -0.64
PCDHGB3-201ENST00000576222 SRSF12Q8WXF0 261 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms