RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 HLA-DMAP28067 261 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 RCVRNP35243 200 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 HRH1P35367 487 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 MECP2P51608 486 aaKnown RBP9.13□□□□□ -0.95
USP43-206ENST00000575346 SYNJ2BPP57105 145 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 OR2B8PP59922 312 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 RPEL1Q2QD12 228 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 C15orf32Q32M92 178 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 THOC7Q6I9Y2 204 aaKnown RBP9.13□□□□□ -0.95
USP43-206ENST00000575346 LPCAT3Q6P1A2 487 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 CMTM1Q8IZ96 169 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 OR51H1Q8NH63 302 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 MRPS26Q9BYN8 205 aaKnown RBP9.13□□□□□ -0.95
USP43-206ENST00000575346 HRASLSQ9HDD0 168 aa9.13□□□□□ -0.95
USP43-206ENST00000575346 FAM212BQ9NTI7 297 aaPredicted RBP9.13□□□□□ -0.95
USP43-206ENST00000575346 TRAV3A0A0B4J244 114 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 DPPA5A6NC42 116 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 A8MZ25 164 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 RLN1P04808 185 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 CSN3P07498 182 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 MYOD1P15172 320 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 AREGP15514 252 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 HIST1H1BP16401 226 aaKnown RBP9.12□□□□□ -0.95
USP43-206ENST00000575346 UCP3P55916 312 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 ZNF585BQ52M93 769 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 GPR107Q5VW38 600 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 SNX29P2Q8IUI4 249 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 DGCR14Q96DF8 476 aaKnown RBP9.12□□□□□ -0.95
USP43-206ENST00000575346 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 TMEM140Q9NV12 185 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 PEMTQ9UBM1 199 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 FBXL7Q9UJT9 491 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 RYR3Q15413 4870 aa9.12□□□□□ -0.95
USP43-206ENST00000575346 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 IGLC7A0M8Q6 106 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 MARCH11A6NNE9 402 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 H0Y980 276 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 LGALS9O00182 355 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 NDUFB8O95169 186 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 PTBP1P26599 531 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP43-206ENST00000575346 HSD17B13Q7Z5P4 300 aaPredicted RBP9.11□□□□□ -0.95
USP43-206ENST00000575346 Q8N1Y9 231 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 OR2K2Q8NGT1 345 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 FCAMRQ8WWV6 532 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 RSRP1Q9BUV0 290 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 COMMD5Q9GZQ3 224 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 U3KQK5 164 aa9.11□□□□□ -0.95
USP43-206ENST00000575346 GGCTO75223 188 aaKnown RBP9.1□□□□□ -0.95
USP43-206ENST00000575346 LPAR6P43657 344 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 ERVK-16P61578 105 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 TSPAN5P62079 268 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 C19orf35Q6ZS72 473 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 GPR141Q7Z602 305 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 HAPLN4Q86UW8 402 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 GPHB5Q86YW7 130 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 C15orf40Q8WUR7 153 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 CCDC140Q96MF4 163 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 THAP7Q9BT49 309 aaPredicted RBP9.1□□□□□ -0.95
USP43-206ENST00000575346 MTFP1Q9UDX5 166 aa9.1□□□□□ -0.95
USP43-206ENST00000575346 TEX50A0A1B0GTY4 177 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 FAM25AB3EWG3 89 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 FAM25CB3EWG5 89 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 FAM25GB3EWG6 89 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 FRMD6-AS1P0C7T7 363 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 TBPP20226 339 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 S100GP29377 79 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 LCN12Q6JVE5 192 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 ADAMTSL5Q6ZMM2 481 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 LHFPL1Q86WI0 220 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 SLC38A6Q8IZM9 456 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 Q8N402 240 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 ARRDC1Q8N5I2 433 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 EEF1AKMT3Q96AZ1 226 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 CXorf58Q96LI9 332 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 ABHD1Q96SE0 405 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 BCL7BQ9BQE9 202 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 QTRT1Q9BXR0 403 aaKnown RBP9.09□□□□□ -0.95
USP43-206ENST00000575346 NDUFA4L2Q9NRX3 87 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 EXTL2Q9UBQ6 330 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 KLK11Q9UBX7 282 aa9.09□□□□□ -0.95
USP43-206ENST00000575346 TRBV7-1A0A0A6YYK4 115 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 PPP5D1E7EU14 171 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 KRASP01116 189 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 REG1AP05451 166 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 TRAPPC2P0DI81 140 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 TRAPPC2BP0DI82 140 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 DEFA4P12838 97 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 RND3P61587 244 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 PHLDA2Q53GA4 152 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 TBC1D26Q86UD7 250 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 GDPD1Q8N9F7 314 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 OR1L8Q8NGR8 309 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 OR52I2Q8NH67 350 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 ZNF486Q96H40 463 aaPredicted RBP9.08□□□□□ -0.96
USP43-206ENST00000575346 TSC22D3Q99576 134 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 ASCL2Q99929 193 aa9.08□□□□□ -0.96
USP43-206ENST00000575346 MIXL1Q9H2W2 232 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms