RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 IL6RP08887 468 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-208ENST00000574755 IGHV1-8P0DP01 117 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 DLX6P56179 175 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 Q8N7P7 452 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 C15orf54Q8N8G6 183 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 OR5AN1Q8NGI8 311 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 TMEM186Q96B77 213 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 NIPSNAP3BQ9BS92 247 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 PLEKHA3Q9HB20 300 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 VAX2Q9UIW0 290 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 ZNF257Q9Y2Q1 563 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 ABCA4P78363 2273 aa11.45□□□□□ -0.58
VPS33B-208ENST00000574755 COLCA2A8K830 154 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 KBTBD11O94819 623 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 DEFA4P12838 97 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 DLK1P80370 383 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 DIAPH2-AS1Q14236 149 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 ACOT6Q3I5F7 207 aaPredicted RBP11.44□□□□□ -0.58
VPS33B-208ENST00000574755 C8orf31Q8N9H6 132 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 OR9G1Q8NH87 305 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 BET1LQ9NYM9 111 aa11.44□□□□□ -0.58
VPS33B-208ENST00000574755 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
VPS33B-208ENST00000574755 TRBV23-1A0A0A0MS06 115 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 CYB5BO43169 146 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 CA2P00918 260 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 PRCDQ00LT1 54 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 RBMS3Q6XE24 437 aaKnown RBP11.43□□□□□ -0.58
VPS33B-208ENST00000574755 IQCF2Q8IXL9 164 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 LINC00311Q8N616 119 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 FLYWCH2Q96CP2 140 aaKnown RBP11.43□□□□□ -0.58
VPS33B-208ENST00000574755 TMEM204Q9BSN7 226 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 TNCP24821 2201 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 A0A087X0M5 115 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 A0A1B0GX30 115 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 PAX6P26367 422 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 PPOXP50336 477 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 FAM71F2Q6NXP2 309 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 ZNF596Q8TC21 504 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 P2RX4Q99571 388 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 TMPRSS5Q9H3S3 457 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 FKBP11Q9NYL4 201 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 DCHS2Q6V1P9 2916 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 ITPR1Q14643 2758 aa11.43□□□□□ -0.58
VPS33B-208ENST00000574755 SFTPCP11686 197 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 CDC34P49427 236 aaPredicted RBP11.42□□□□□ -0.58
VPS33B-208ENST00000574755 AVPI1Q5T686 147 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 UNQ6494/PRO21346Q6UXR6 183 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 OR4C13Q8NGP0 309 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 TVP23CQ96ET8 276 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 NABP2Q9BQ15 211 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 TUBA4BQ9H853 241 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 TEX50A0A1B0GTY4 177 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 IGHV2-70P01814 119 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 CRYBA1P05813 215 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 FLI1Q01543 452 aaPredicted RBP11.42□□□□□ -0.58
VPS33B-208ENST00000574755 PMS2P11Q13670 270 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 TMEM177Q53S58 311 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 GCSAMLQ5JQS6 135 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 PDPNQ86YL7 162 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 TGIF2LXQ8IUE1 241 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 OR5B3Q8NH48 314 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 ST6GALNAC6Q969X2 333 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 MGST2Q99735 147 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 TMEM133Q9H2Q1 129 aa11.42□□□□□ -0.58
VPS33B-208ENST00000574755 SOX15O60248 233 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 TAGLN2P37802 199 aaKnown RBP11.41□□□□□ -0.58
VPS33B-208ENST00000574755 OPRK1P41145 380 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 PSMB3P49720 205 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
VPS33B-208ENST00000574755 ARSJQ5FYB0 599 aaPredicted RBP11.41□□□□□ -0.58
VPS33B-208ENST00000574755 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 PRORYQ9H606 182 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 A0A1W2PPH5 198 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 ZNF137PP52743 207 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 SMUG1Q53HV7 270 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 HIST1H2BAQ96A08 127 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 PXMP4Q9Y6I8 212 aa11.41□□□□□ -0.58
VPS33B-208ENST00000574755 HRNRQ86YZ3 2850 aaPredicted RBP11.41□□□□□ -0.58
VPS33B-208ENST00000574755 A0A1W2PPV4 95 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 LY6HO94772 140 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 FSTL3O95633 263 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 RAB13P51153 203 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 RPL8P62917 257 aaKnown RBP11.4□□□□□ -0.58
VPS33B-208ENST00000574755 TEPPQ6URK8 271 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 PATZ1Q9HBE1 687 aaKnown RBP11.4□□□□□ -0.58
VPS33B-208ENST00000574755 MANBALQ9NQG1 85 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 MT-ND4LP03901 98 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
VPS33B-208ENST00000574755 IL3RAP26951 378 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms