RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MSMO1Q15800 293 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 VAX1Q5SQQ9 334 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 TMEM69Q5SWH9 247 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 ACSM6Q6P461 480 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 DHRS11Q6UWP2 260 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 VKORC1L1Q8N0U8 176 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 OR13F1Q8NGS4 319 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 OR4S2Q8NH73 311 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 VSTM2AQ8TAG5 236 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 SRSF12Q8WXF0 261 aaKnown RBP5.71□□□□□ -1.5
NUP88-205ENST00000572809 SNAPC3Q92966 411 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 SLC25A46Q96AG3 418 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 USMG5Q96IX5 58 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 OR2A7Q96R45 310 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 OR4C12Q96R67 309 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 PRR25Q96S07 402 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 SPIN2AQ99865 258 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 B9D2Q9BPU9 175 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 SPIN2BQ9BPZ2 258 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 AIFM2Q9BRQ8 373 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 ELOVL1Q9BW60 279 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 FUNDC2Q9BWH2 189 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 SLC5A7Q9GZV3 580 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 IFT46Q9NQC8 304 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 COMMD3Q9UBI1 195 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 BTF3P20290 206 aaKnown RBP5.7□□□□□ -1.5
NUP88-205ENST00000572809 ZP3P21754 424 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 MAS1LP35410 378 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 KIR2DS2P43631 304 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 RFX2P48378 723 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 TAS2R20P59543 309 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 FXYD4P59646 89 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 VBP1P61758 197 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 NCS1P62166 190 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 KLF5Q13887 457 aaPredicted RBP5.7□□□□□ -1.5
NUP88-205ENST00000572809 TATDN3Q17R31 274 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 ZNF343Q6P1L6 599 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 SSX9Q7RTT3 188 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 SLC25A42Q86VD7 318 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 SPAG16Q8N0X2 631 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 PUSL1Q8N0Z8 303 aaKnown RBP5.7□□□□□ -1.5
NUP88-205ENST00000572809 TTC9CQ8N5M4 171 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 ADAD2Q8NCV1 583 aaKnown RBP5.7□□□□□ -1.5
NUP88-205ENST00000572809 TMEM167AQ8TBQ9 72 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 CMTM3Q96MX0 182 aa5.7□□□□□ -1.5
NUP88-205ENST00000572809 PEF1Q9UBV8 284 aaKnown RBP5.7□□□□□ -1.5
NUP88-205ENST00000572809 HMX3A6NHT5 357 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 E7EUB6 86 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 SULT1C2O00338 296 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 KBTBD11O94819 623 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 HPRT1P00492 218 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 PMP2P02689 132 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 PRH1P02810 166 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 EIF4EP06730 217 aaKnown RBP5.69□□□□□ -1.5
NUP88-205ENST00000572809 NHLRC4P0CG21 123 aaPredicted RBP5.69□□□□□ -1.5
NUP88-205ENST00000572809 SPNP16150 400 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 GCSHP23434 173 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 GNRHRP30968 328 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 RORCP51449 518 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 HERV-K104P61576 105 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 DEFA5Q01523 94 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 ATP5G2Q06055 141 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 CATR1Q13166 79 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 DYRK1AQ13627 763 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 C10orf55Q5SWW7 151 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 ZNF818PQ6ZRF7 136 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 TMEM17Q86X19 198 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 OR6Q1Q8NGQ2 317 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 OR5H2Q8NGV7 314 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 OR6F1Q8NGZ6 308 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 CD300LFQ8TDQ1 290 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 BORCS5Q969J3 196 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 FYTTD1Q96QD9 318 aaKnown RBP5.69□□□□□ -1.5
NUP88-205ENST00000572809 ZNF2Q9BSG1 426 aaPredicted RBP5.69□□□□□ -1.5
NUP88-205ENST00000572809 AKIP1Q9NQ31 210 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 SLC2A9Q9NRM0 540 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 EHFQ9NZC4 300 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 SMAD5-AS1Q9Y6J3 95 aa5.69□□□□□ -1.5
NUP88-205ENST00000572809 DNAH3Q8TD57 4116 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 TRBV9A0A0B4J1U6 114 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 LOC102723971A0A1B0GUV8 181 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 DPPA5A6NC42 116 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 FAM223BA6NKX1 122 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 NPIPB5A8MRT5 1133 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 TEX22C9J3V5 150 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 DIRC3C9JPN6 131 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 RBFOX2O43251 390 aaKnown RBP eCLIP5.68□□□□□ -1.5
NUP88-205ENST00000572809 HPGDSO60760 199 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 RBMXL2O75526 392 aaKnown RBP5.68□□□□□ -1.5
NUP88-205ENST00000572809 PGLYRP1O75594 196 aaPredicted RBP5.68□□□□□ -1.5
NUP88-205ENST00000572809 TRBV12-3P01733 135 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 APOA1P02647 267 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 IL6RP08887 468 aaPredicted RBP5.68□□□□□ -1.5
NUP88-205ENST00000572809 ZNF735P0CB33 412 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 GP9P14770 177 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 NQO2P16083 231 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 ELK1P19419 428 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 HLA-DMAP28067 261 aa5.68□□□□□ -1.5
NUP88-205ENST00000572809 RPL27AP46776 148 aaKnown RBP5.68□□□□□ -1.5
NUP88-205ENST00000572809 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms