RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DOCK3Q8IZD9 2030 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 GREB1LQ9C091 1923 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 COL11A2P13942 1736 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 ARHGAP31Q2M1Z3 1444 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 PDS5BQ9NTI5 1447 aa3.7□□□□□ -1.82
TOPBP1-210ENST00000572787 ADGBQ8N7X0 1667 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 LOC102724200A0A096LPH7 203 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 IRGMA1A4Y4 181 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 IGLL5B9A064 214 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 NPFFO15130 113 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 LYZL6O75951 148 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 IGHV3-23P01764 117 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF705DP0CH99 300 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 AKAIN1P0CW23 69 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 ATP6V0CP27449 155 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 RAB5CP51148 216 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 DAPP51397 102 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 COL5A1-AS1Q5SY13 56 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 BCL2L15Q5TBC7 163 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 C1orf140Q5VVS0 124 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 SLC25A34Q6PIV7 304 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 Q8NBF4 154 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 NPBQ8NG41 125 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 OR8A1Q8NGG7 326 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 FNDC9Q8TBE3 224 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 RAB2BQ8WUD1 216 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 PP6455Q8WZ26 134 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 NEUROG1Q92886 237 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 TCEAL2Q9H3H9 227 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 MOB4Q9Y3A3 225 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 PHLPP1O60346 1717 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 SPATA31E1Q6ZUB1 1445 aa3.69□□□□□ -1.82
TOPBP1-210ENST00000572787 CCDC18Q5T9S5 1454 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 ARHGAP23Q9P227 1491 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 A0A0J9YXY3 114 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 LY6LH3BQJ8 138 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF253O75346 499 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 SERF1AO75920 110 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 SRP19P09132 144 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 LINC00869P0C866 280 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF728P0DKX0 622 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 LINC00694P0DN24 101 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 HLA-EP13747 358 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 NFYBP25208 207 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 NDUFA6P56556 154 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 TMEM241Q24JQ0 296 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 RRN3P1Q2M238 152 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 CCSMST1Q4G0I0 132 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 CEMP1Q6PRD7 247 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 TMEM14EPQ6UXP3 125 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 GTF2H5Q6ZYL4 71 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 LCA10Q71F78 164 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 SNX29P2Q8IUI4 249 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 MSRB3Q8IXL7 192 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF645Q8N7E2 425 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 SLC25A29Q8N8R3 303 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 ZDHHC22Q8N966 263 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 GGTLC1Q9BX51 225 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 TMEM191AQ9H0A3 160 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 RERGLQ9H628 205 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 TUBA4BQ9H853 241 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 SCP2D1Q9UJQ7 156 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 HECW1Q76N89 1606 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 CEP162Q5TB80 1403 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 TTC3P53804 2025 aa3.68□□□□□ -1.82
TOPBP1-210ENST00000572787 MBD5Q9P267 1494 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 TRAV41A0A0B4J266 112 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 IGKV6-21A0A0C4DH24 114 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 TRBV7-6A0A0J9YX20 115 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 LOC107984640A0A0U1RRK4 108 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 A0A1B0GW54 56 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 LINC00862A6NCI5 91 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 A8MWP6 167 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 SCO1O75880 301 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 MT-ND4LP03901 98 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 CD7P09564 240 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 HIST1H1DP16402 221 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF20P17024 532 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 SDC2P34741 201 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 TMBIM6P55061 237 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 LINC01547P58512 204 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 MPV17L2Q567V2 206 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 TMEM244Q5VVB8 128 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 LYPD2Q6UXB3 125 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 PDPNQ86YL7 162 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 C4orf33Q8N1A6 199 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 C9orf62Q8N4C0 152 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 RNF175Q8N4F7 328 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 C11orf42Q8N5U0 333 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 CAMK2N2Q96S95 79 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 PEBP4Q96S96 227 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 SNHG12Q9BXW3 62 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 OTORQ9NRC9 128 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 CA10Q9NS85 328 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 METTL1Q9UBP6 276 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 MRPS16Q9Y3D3 137 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 MYH15Q9Y2K3 1946 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 MYO5BQ9ULV0 1848 aa3.67□□□□□ -1.82
TOPBP1-210ENST00000572787 ADAMTSL1Q8N6G6 1762 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms