RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 OR2B8PP59922 312 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 NANOS2P60321 138 aaKnown RBP14.12□□□□□ -0.15
NUP88-203ENST00000572019 RPL8P62917 257 aaKnown RBP14.12□□□□□ -0.15
NUP88-203ENST00000572019 MLLT11Q13015 90 aaPredicted RBP14.12□□□□□ -0.15
NUP88-203ENST00000572019 MFSD4AQ8N468 514 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 OR5B3Q8NH48 314 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 VSTM2AQ8TAG5 236 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 NUDCD2Q8WVJ2 157 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 TMEM190Q8WZ59 177 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 MARC2Q969Z3 335 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 ZNF414Q96IQ9 312 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 KIR2DL5BA0A0G2JN68 375 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 KIR2DL5BA0A0G2JPC4 375 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 UBE2CO00762 179 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 TSPAN4O14817 238 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 TNFSF12O43508 249 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 ZNF207O43670 478 aaKnown RBP14.11□□□□□ -0.15
NUP88-203ENST00000572019 PTHLHP12272 177 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 GALP22466 123 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 DTYMKP23919 212 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 TRAM1Q15629 374 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 SSX1Q16384 188 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 TIMM50Q3ZCQ8 353 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 PLET1Q6UQ28 207 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 APRG1Q8IVJ8 170 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 KIR2DL5AQ8N109 375 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 STPG3Q8N7X2 389 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 OR10W1Q8NGF6 305 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 KIR2DL5BQ8NHK3 375 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 HSD17B10Q99714 261 aaKnown RBP14.11□□□□□ -0.15
NUP88-203ENST00000572019 ATG5Q9H1Y0 275 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 DUSP21Q9H596 190 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 MAP6D1Q9H9H5 199 aa14.11□□□□□ -0.15
NUP88-203ENST00000572019 CASQ2O14958 399 aaPredicted RBP14.1□□□□□ -0.15
NUP88-203ENST00000572019 SSX5O60225 188 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 HIST1H1BP16401 226 aaKnown RBP14.1□□□□□ -0.15
NUP88-203ENST00000572019 ELLP55199 621 aaPredicted RBP14.1□□□□□ -0.15
NUP88-203ENST00000572019 CDNFQ49AH0 187 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 ZNF773Q6PK81 442 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 SLC38A6Q8IZM9 456 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 CXorf58Q96LI9 332 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 MGLLQ99685 303 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 SCN3BQ9NY72 215 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 UFC1Q9Y3C8 167 aa14.1□□□□□ -0.15
NUP88-203ENST00000572019 IGHV3-21A0A0B4J1V1 117 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 TMEM235A6NFC5 223 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 OR2T8A6NH00 312 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 TGOLN2O43493 480 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 DHFRP00374 187 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 PSMA1P25786 263 aaKnown RBP14.09□□□□□ -0.15
NUP88-203ENST00000572019 MFAP2P55001 183 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 GATAD1Q8WUU5 269 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 CHRDL1Q9BU40 450 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 CCL28Q9NRJ3 127 aa14.09□□□□□ -0.15
NUP88-203ENST00000572019 F8W735 103 aaPredicted RBP14.08□□□□□ -0.16
NUP88-203ENST00000572019 HACD4Q5VWC8 232 aa14.08□□□□□ -0.16
NUP88-203ENST00000572019 HRASLSQ9HDD0 168 aa14.08□□□□□ -0.16
NUP88-203ENST00000572019 ACOT13Q9NPJ3 140 aa14.08□□□□□ -0.16
NUP88-203ENST00000572019 BET1LQ9NYM9 111 aa14.08□□□□□ -0.16
NUP88-203ENST00000572019 FBXL17Q9UF56 701 aa14.08□□□□□ -0.16
NUP88-203ENST00000572019 FAT2Q9NYQ8 4349 aa14.08□□□□□ -0.16
NUP88-203ENST00000572019 TRAV1-2A0A0B4J238 106 aa14.07□□□□□ -0.16
NUP88-203ENST00000572019 DEFB4AO15263 64 aa14.07□□□□□ -0.16
NUP88-203ENST00000572019 RGS10O43665 173 aa14.07□□□□□ -0.16
NUP88-203ENST00000572019 CTSDP07339 412 aaPredicted RBP14.07□□□□□ -0.16
NUP88-203ENST00000572019 PTBP1P26599 531 aaKnown RBP eCLIP14.07□□□□□ -0.16
NUP88-203ENST00000572019 CNIH2Q6PI25 160 aa14.07□□□□□ -0.16
NUP88-203ENST00000572019 RYR1P21817 5038 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 METTL21EPA6NDL7 271 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 UPK2O00526 184 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 SLC22A5O76082 557 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 HRASP01112 189 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 ADMP35318 185 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 ZNF66Q6ZN08 573 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 TMEM217Q8N7C4 229 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 CD300LFQ8TDQ1 290 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 GALNT14Q96FL9 552 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 C20orf24Q9BUV8 137 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 CCDC90BQ9GZT6 254 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 DAZ1Q9NQZ3 744 aaKnown RBP14.06□□□□□ -0.16
NUP88-203ENST00000572019 AGRNO00468 2067 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 DNAH2Q9P225 4427 aa14.06□□□□□ -0.16
NUP88-203ENST00000572019 MUC4Q99102 2169 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 SULT1C2O00338 296 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 PDCD5O14737 125 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 CTXN2P0C2S0 81 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 WT1-ASQ06250 92 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 SPAG16Q8N0X2 631 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 SECTM1Q8WVN6 248 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 CENPOQ9BU64 300 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 ANXA10Q9UJ72 324 aa14.05□□□□□ -0.16
NUP88-203ENST00000572019 IGHV3-49A0A0A0MS15 119 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 RAB3BP20337 219 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 AQP4P55087 323 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 OR4A5Q8NH83 315 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 C11orf45Q8TAV5 145 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 VN1R17PQ8TDU5 208 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 RNF2Q99496 336 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 RARRES2Q99969 163 aa14.04□□□□□ -0.16
NUP88-203ENST00000572019 DCSTAMPQ9H295 470 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms