RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 EFNB3Q15768 340 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 KIAA1644Q3SXP7 199 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 CENPWQ5EE01 88 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 MED12LQ86YW9 2145 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 OR2Y1Q8NGV0 311 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
SMG6-207ENST00000570756 K7ESF4 209 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 SPINK4O60575 86 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 CXCL12P48061 93 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 FOXG1P55316 489 aaPredicted RBP12.8□□□□□ -0.36
SMG6-207ENST00000570756 RAB31Q13636 194 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 TIGITQ495A1 244 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 SLC35E4Q6ICL7 350 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 UNQ5815/PRO19632Q6UWF5 114 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 TUSC5Q8IXB3 177 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 OR4C5Q8NGB2 326 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 NPVFQ9HCQ7 196 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 MRPL27Q9P0M9 148 aaKnown RBP12.8□□□□□ -0.36
SMG6-207ENST00000570756 IGHV1-69-2A0A0G2JMI3 117 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 LINC00473A8K010 186 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 BMPR1BO00238 502 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 OR9G9P0C7N8 305 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 TNFSF4P23510 183 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 FBLN7Q53RD9 439 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 PRAMEF5Q5TYX0 476 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 PRAMEF6Q5VXH4 476 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 WDR86Q86TI4 376 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 OR52E5Q8NH55 327 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 TSKUQ8WUA8 353 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 SSMEM1Q8WWF3 244 aa12.8□□□□□ -0.36
SMG6-207ENST00000570756 IGHV2-70DA0A0C4DH43 119 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 NTF3P20783 257 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 PLGLB1Q02325 96 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 LYG1Q8N1E2 194 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 ZNF439Q8NDP4 499 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
SMG6-207ENST00000570756 IL19Q9UHD0 177 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 LSM4Q9Y4Z0 139 aaKnown RBP12.79□□□□□ -0.36
SMG6-207ENST00000570756 PRSS46E5RG02 174 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 APCSP02743 223 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 FOLR3P41439 243 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 VASH2Q86V25 355 aa12.79□□□□□ -0.36
SMG6-207ENST00000570756 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
SMG6-207ENST00000570756 TRAV9-2A0A087WT02 112 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 ISLRO14498 428 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 PSPNO60542 156 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 SELENOVP59797 346 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 SRYQ05066 204 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 TEPPQ6URK8 271 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 PQLC2Q6ZP29 291 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 STPG3Q8N7X2 389 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 OR4P4Q8NGL7 312 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 LOC105371242A0A075B767 164 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 A0A1W2PN81 502 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 MT-CO3P00414 261 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 VDAC2P45880 294 aaPredicted RBP12.78□□□□□ -0.36
SMG6-207ENST00000570756 FAM19A2Q8N3H0 131 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
SMG6-207ENST00000570756 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
SMG6-207ENST00000570756 LY6G6EA0A0G2JKS1 128 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 GFRA3O60609 400 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.37
SMG6-207ENST00000570756 ERVK-16P61578 105 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 SLC35B1P78383 322 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 SPATA31B1PQ5VZV4 182 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 FAM53AQ6NSI3 398 aaPredicted RBP12.77□□□□□ -0.37
SMG6-207ENST00000570756 DOLPP1Q86YN1 238 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 ATOH7Q8N100 152 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 SLC25A10Q9UBX3 287 aaPredicted RBP12.77□□□□□ -0.37
SMG6-207ENST00000570756 BOKQ9UMX3 212 aaPredicted RBP12.77□□□□□ -0.37
SMG6-207ENST00000570756 U3KQA8 63 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 GDF9O60383 454 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 CGAP01215 116 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 GABRA2P47869 451 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 TCL1AP56279 114 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 AESQ08117 197 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 MRPL54Q6P161 138 aaKnown RBP12.77□□□□□ -0.37
SMG6-207ENST00000570756 SLC24A4Q8NFF2 622 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 CLEC7AQ9BXN2 247 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 ZNF331Q9NQX6 463 aaPredicted RBP12.77□□□□□ -0.37
SMG6-207ENST00000570756 PSG11Q9UQ72 335 aa12.77□□□□□ -0.37
SMG6-207ENST00000570756 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 CFAP54Q96N23 3096 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 IGLC7A0M8Q6 106 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 FOXH1O75593 365 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 CRYBB3P26998 211 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 CEBPDP49716 269 aaPredicted RBP12.76□□□□□ -0.37
SMG6-207ENST00000570756 FXYD3Q14802 87 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
SMG6-207ENST00000570756 NANOS1Q8WY41 292 aaKnown RBP12.76□□□□□ -0.37
SMG6-207ENST00000570756 HES4Q9HCC6 221 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 MUC6Q6W4X9 2439 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 ZNF318Q5VUA4 2279 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 ZNF891A8MT65 544 aaPredicted RBP12.76□□□□□ -0.37
SMG6-207ENST00000570756 J3QW42 95 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 FCGR3BO75015 233 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 HSBP1O75506 76 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms