RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	MSMO1	Q15800	293 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	CNIH2	Q6PI25	160 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	PLET1	Q6UQ28	207 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	UNQ9165/PRO28630	Q6UXU0	137 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	RPP25L	Q8N5L8	163 aa	Known RBP	11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ATP6V0B	Q99437	205 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	MGLL	Q99685	303 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676	DUSP21	Q9H596	190 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676		S4R3C0	116 aa		11.69	□□□□□ -0.54
HERPUD1-215	ENST00000568676		A0A1B0GW64	132 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	OR4C46	A6NHA9	309 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	RGS10	O43665	173 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	SCGN	O76038	276 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	NFYA	P23511	347 aa	Predicted RBP	11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	GPR183	P32249	361 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	HACD4	Q5VWC8	232 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	C19orf35	Q6ZS72	473 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	MFSD4A	Q8N468	514 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ZNF502	Q8TBZ5	544 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	GALNT14	Q96FL9	552 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	DAZ1	Q9NQZ3	744 aa	Known RBP	11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	SPATA2	Q9UM82	520 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	SELENOK	Q9Y6D0	94 aa		11.68	□□□□□ -0.54
HERPUD1-215	ENST00000568676	MFSD2B	A6NFX1	497 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676		J3QRK9	145 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	MYL9	P24844	172 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	TCTA	P57738	103 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	THOC7	Q6I9Y2	204 aa	Known RBP	11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	VN1R17P	Q8TDU5	208 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	NRG4	Q8WWG1	115 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	TMEM190	Q8WZ59	177 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	CCDC90B	Q9GZT6	254 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	MFF	Q9GZY8	342 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ATG5	Q9H1Y0	275 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	KMT2A	Q03164	3969 aa		11.67	□□□□□ -0.54
HERPUD1-215	ENST00000568676	IGKV1D-13	A0A0B4J2D9	117 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	TGOLN2	O43493	480 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	IGKV1-13	P0DP09	117 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	RAB3B	P20337	219 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	HSPA13	P48723	471 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	AQP4	P55087	323 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	CMC4	P56277	68 aa	Predicted RBP	11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	BRWD1-AS2	P59051	145 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	OR2B8P	P59922	312 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	TIMM50	Q3ZCQ8	353 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	CDNF	Q49AH0	187 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	SPSB3	Q6PJ21	355 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	PRSS48	Q7RTY5	328 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ZBTB34	Q8NCN2	500 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	GATAD1	Q8WUU5	269 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	COMMD5	Q9GZQ3	224 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	MAP6D1	Q9H9H5	199 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	TAS2R8	Q9NYW2	309 aa		11.66	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ATP6V1G2	O95670	118 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	REG1A	P05451	166 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	TAS2R31	P59538	309 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ODF3L2	Q3SX64	289 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	SSX9	Q7RTT3	188 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	BSCL2	Q96G97	398 aa	Predicted RBP	11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	HRASLS	Q9HDD0	168 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	UBQLN2	Q9UHD9	624 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	ANXA10	Q9UJ72	324 aa		11.65	□□□□□ -0.54
HERPUD1-215	ENST00000568676	IGLC7	A0M8Q6	106 aa		11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676	CGB1	A6NKQ9	187 aa		11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676		K7EMT4	169 aa		11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676	NDUFA4	O00483	81 aa		11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676	OR10A3	P58181	314 aa		11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676	POU2AF1	Q16633	256 aa		11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676	ELF5	Q9UKW6	265 aa	Predicted RBP	11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676	HERC2	O95714	4834 aa		11.64	□□□□□ -0.55
HERPUD1-215	ENST00000568676	DEDD	O75618	318 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	HPRT1	P00492	218 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	IFNA4	P05014	189 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	NQO2	P16083	231 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	GNG2	P59768	71 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	ARPC4	P59998	168 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	CATR1	Q13166	79 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	IZUMO2	Q6UXV1	221 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	SPAG16	Q8N0X2	631 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	GDPD1	Q8N9F7	314 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	CD300LF	Q8TDQ1	290 aa		11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	QTRT1	Q9BXR0	403 aa	Known RBP	11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	C11orf68	Q9H3H3	251 aa	Known RBP	11.63	□□□□□ -0.55
HERPUD1-215	ENST00000568676	IGHV3-35	A0A0C4DH35	117 aa		11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	TRDV1	A0A1B0GX56	115 aa		11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	UPK2	O00526	184 aa		11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	ADM	P35318	185 aa		11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	TBCE	Q15813	527 aa	Predicted RBP	11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	ZNF367	Q7RTV3	350 aa		11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	CSTL1	Q9H114	145 aa		11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	NDUFB11	Q9NX14	153 aa		11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	RRP15	Q9Y3B9	282 aa	Known RBP	11.62	□□□□□ -0.55
HERPUD1-215	ENST00000568676	C15orf62	A8K5M9	175 aa		11.61	□□□□□ -0.55

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