RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 THYN1Q9P016 225 aa8.67□□□□□ -1.02
GTF3C1-209ENST00000568569 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
GTF3C1-209ENST00000568569 RBMX2Q9Y388 322 aaKnown RBP8.67□□□□□ -1.02
GTF3C1-209ENST00000568569 A0A1B0GVY2 172 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 IGLL5B9A064 214 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 XRCC3O43542 346 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 ARL6IP5O75915 188 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 HIST1H1DP16402 221 aaKnown RBP8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 HLA-GP17693 338 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 GADD45AP24522 165 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 PTBP1P26599 531 aaKnown RBP eCLIP8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 ADMP35318 185 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 TALDO1P37837 337 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 PLA2G7Q13093 441 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 IRF3Q14653 427 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 SSX9Q7RTT3 188 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 APRG1Q8IVJ8 170 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 C8orf59Q8N0T1 100 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 BPIFB6Q8NFQ5 453 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 TCTEX1D2Q8WW35 142 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 UFD1Q92890 307 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 APLNQ9ULZ1 77 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 OR2W1Q9Y3N9 320 aa8.66□□□□□ -1.02
GTF3C1-209ENST00000568569 A0A075B6Q4 140 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 CGB1A6NKQ9 187 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 C11orf94C9JXX5 98 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 HRASP01112 189 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 IGLV2-14P01704 120 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 HLA-DQB1P01920 261 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 GNAO1P09471 354 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 RPA2P15927 270 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 MFAP2P55001 183 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 LIPKQ5VXJ0 399 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 TMEM91Q6ZNR0 172 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 OR4A5Q8NH83 315 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 C8orf4Q9NR00 106 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 SPATA2Q9UM82 520 aa8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 LSM2Q9Y333 95 aaKnown RBP8.65□□□□□ -1.02
GTF3C1-209ENST00000568569 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 IGKV1D-8A0A087WSZ0 117 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 IGLC7A0M8Q6 106 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 OR2T8A6NH00 312 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 RAB27BO00194 218 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 NDUFA4O00483 81 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 CYB5BO43169 146 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 CTSDP07339 412 aaPredicted RBP8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 CTXN2P0C2S0 81 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 NFYAP23511 347 aaPredicted RBP8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 DTYMKP23919 212 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 CALRP27797 417 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 CMC4P56277 68 aaPredicted RBP8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 OR2B8PP59922 312 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 SPSB3Q6PJ21 355 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 VN1R17PQ8TDU5 208 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 BSCL2Q96G97 398 aaPredicted RBP8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 SRSF8Q9BRL6 282 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 AIFM2Q9BRQ8 373 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 C20orf24Q9BUV8 137 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 BET1LQ9NYM9 111 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 TAS2R8Q9NYW2 309 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 V9GY05 133 aa8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-209ENST00000568569 IGKV1D-13A0A0B4J2D9 117 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 K7EMT4 169 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 DEFB4AO15263 64 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 IGKV1-13P0DP09 117 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 PSMA1P25786 263 aaKnown RBP8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 BRWD1-AS2P59051 145 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 EIF4EBP1Q13541 118 aaPredicted RBP8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 TRAM1Q15629 374 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 ZNF124Q15973 351 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 TIMM50Q3ZCQ8 353 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 HES5Q5TA89 166 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 ZNF66Q6ZN08 573 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 MFSD4AQ8N468 514 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 PACRGLQ8N7B6 248 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 HRH4Q9H3N8 390 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 HRASLSQ9HDD0 168 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 MUC4Q99102 2169 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 ABCA13Q86UQ4 5058 aa8.63□□□□□ -1.03
GTF3C1-209ENST00000568569 C15orf62A8K5M9 175 aa8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 RAB6AP20340 208 aa8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 RPS25P62851 125 aaKnown RBP8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 TMEM187Q14656 261 aa8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 ARL6IP1Q15041 203 aa8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 COMMD5Q9GZQ3 224 aa8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 ETV7Q9Y603 341 aa8.62□□□□□ -1.03
GTF3C1-209ENST00000568569 IGHV3OR16-8A0A075B7F1 116 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 METTL21EPA6NDL7 271 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 PRSS29PA6NIE9 313 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 PTGES3LE9PB15 166 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 ZNF207O43670 478 aaKnown RBP8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 MRPS14O60783 128 aaKnown RBP8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 TFPI2P48307 235 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 NR2C2APQ86WQ0 139 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
GTF3C1-209ENST00000568569 RNF2Q99496 336 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms