RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CDKN1AP38936 164 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-221ENST00000567935 HLA-DRB5Q30154 266 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 OR4A47Q6IF82 309 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 UQCC3Q6UW78 93 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 IL34Q6ZMJ4 242 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 TMEM217Q8N7C4 229 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 IGFBPL1Q8WX77 278 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 QTRT1Q9BXR0 403 aaKnown RBP11.86□□□□□ -0.51
COMMD4-221ENST00000567935 REG4Q9BYZ8 158 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 HIPK2Q9H2X6 1198 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 TMEM14BQ9NUH8 114 aa11.86□□□□□ -0.51
COMMD4-221ENST00000567935 H3BP45 60 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 UPK2O00526 184 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 SHOXO15266 292 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 LY6HO94772 140 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 ARG1P05089 322 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 METTL15P1P0C7V9 234 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 HSPE1P61604 102 aaKnown RBP11.85□□□□□ -0.51
COMMD4-221ENST00000567935 TMEM267Q0VDI3 215 aaPredicted RBP11.85□□□□□ -0.51
COMMD4-221ENST00000567935 SLC25A24Q6NUK1 477 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 DPPA3Q6W0C5 159 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 SSX9Q7RTT3 188 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 LILRB2Q8N423 598 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 ZNF525Q8N782 197 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 OR10P1Q8NGE3 313 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 LHX4Q969G2 390 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 MARC2Q969Z3 335 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 FLYWCH2Q96CP2 140 aaKnown RBP11.85□□□□□ -0.51
COMMD4-221ENST00000567935 MMP26Q9NRE1 261 aa11.85□□□□□ -0.51
COMMD4-221ENST00000567935 A8MXK9 166 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 C22orf46C9J442 243 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 KRBOX1C9JBD0 128 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 TEX46H3BTG2 121 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 H7C2Y5 167 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 I3L521 148 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
COMMD4-221ENST00000567935 ATP6V0CP27449 155 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 LGALS7P47929 136 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 PDLIM4P50479 330 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 F2RL1P55085 397 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 COMMD1Q8N668 190 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 HSD17B11Q8NBQ5 300 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 OR11H6Q8NGC7 330 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 OR5B3Q8NH48 314 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 HARBI1Q96MB7 349 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 PSMG3Q9BT73 122 aaPredicted RBP11.84□□□□□ -0.51
COMMD4-221ENST00000567935 TMEM147Q9BVK8 224 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 GGACTQ9BVM4 153 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 UNKLQ9H9P5 680 aaKnown RBP11.84□□□□□ -0.51
COMMD4-221ENST00000567935 ENY2Q9NPA8 101 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 ONECUT1Q9UBC0 465 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 TCF19Q9Y242 345 aa11.84□□□□□ -0.51
COMMD4-221ENST00000567935 BUB1B-PAK6H3BSN5 160 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 SOX15O60248 233 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 KBTBD11O94819 623 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 IGHV2-5P01817 119 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 USF1P22415 310 aaPredicted RBP11.83□□□□□ -0.52
COMMD4-221ENST00000567935 PRTN3P24158 256 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 VDAC2P45880 294 aaPredicted RBP11.83□□□□□ -0.52
COMMD4-221ENST00000567935 OR2B8PP59922 312 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 RAB11AP62491 216 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 MAPK1IP1LQ8NDC0 245 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 RNF5Q99942 180 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 TIMM9Q9Y5J7 89 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 KPTNQ9Y664 436 aa11.83□□□□□ -0.52
COMMD4-221ENST00000567935 MEGF8Q7Z7M0 2845 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 NDUFS8O00217 210 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 CEACAM3P40198 252 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-221ENST00000567935 SERF2P84101 59 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 PJVKQ0ZLH3 352 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 VMA21Q3ZAQ7 101 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 TOR2AQ5JU69 321 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 VKORC1L1Q8N0U8 176 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 LYPD6BQ8NI32 183 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 TMEM167AQ8TBQ9 72 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 CCL19Q99731 98 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 MS4A7Q9GZW8 240 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-221ENST00000567935 HEYLQ9NQ87 328 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-221ENST00000567935 UQCC1Q9NVA1 299 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 ZNRD1Q9P1U0 126 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 OR51B2Q9Y5P1 312 aa11.82□□□□□ -0.52
COMMD4-221ENST00000567935 PMS2P5A8MQ11 134 aa11.81□□□□□ -0.52
COMMD4-221ENST00000567935 INS-IGF2F8WCM5 200 aa11.81□□□□□ -0.52
COMMD4-221ENST00000567935 PRH1P02810 166 aa11.81□□□□□ -0.52
COMMD4-221ENST00000567935 IGKV1-16P04430 117 aa11.81□□□□□ -0.52
COMMD4-221ENST00000567935 SAA1P0DJI8 122 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-221ENST00000567935 ZP3P21754 424 aa11.81□□□□□ -0.52
COMMD4-221ENST00000567935 CAMLGP49069 296 aa11.81□□□□□ -0.52
COMMD4-221ENST00000567935 PRCDQ00LT1 54 aa11.81□□□□□ -0.52
COMMD4-221ENST00000567935 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms