RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 SLC38A6Q8IZM9 456 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 OR5B3Q8NH48 314 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 VN1R17PQ8TDU5 208 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 CASTOR1Q8WTX7 329 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 DGCR14Q96DF8 476 aaKnown RBP8.55□□□□□ -1.04
CDH3-206ENST00000567674 PRR25Q96S07 402 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 ZNF2Q9BSG1 426 aaPredicted RBP8.55□□□□□ -1.04
CDH3-206ENST00000567674 U3KQK5 164 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 J3QRK9 145 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 LY86O95711 162 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 RFX2P48378 723 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 ELLP55199 621 aaPredicted RBP8.54□□□□□ -1.04
CDH3-206ENST00000567674 TSPAN5P62079 268 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 ZNF45Q02386 682 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 EXOSC2Q13868 293 aaKnown RBP8.54□□□□□ -1.04
CDH3-206ENST00000567674 CTF1Q16619 201 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 C15orf32Q32M92 178 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 FAM106AQ4KMX7 169 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 AADACL3Q5VUY0 350 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 SGPP2Q8IWX5 399 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 ARRDC1Q8N5I2 433 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 DMBX1Q8NFW5 382 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 OR1L8Q8NGR8 309 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 MARC2Q969Z3 335 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 EEF1AKMT3Q96AZ1 226 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 QTRT1Q9BXR0 403 aaKnown RBP8.54□□□□□ -1.04
CDH3-206ENST00000567674 MRPS26Q9BYN8 205 aaKnown RBP8.54□□□□□ -1.04
CDH3-206ENST00000567674 HRASLSQ9HDD0 168 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 GAR1Q9NY12 217 aaKnown RBP8.54□□□□□ -1.04
CDH3-206ENST00000567674 COMMD3Q9UBI1 195 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 DMRT1Q9Y5R6 373 aa8.54□□□□□ -1.04
CDH3-206ENST00000567674 IGLV11-55A0A075B6I3 123 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 BMPR1BO00238 502 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 ATG12O94817 140 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 CSN3P07498 182 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 DEFA4P12838 97 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 HRH1P35367 487 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 SYNJ2BPP57105 145 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 FXYD4P59646 89 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 OR2B8PP59922 312 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 RND3P61587 244 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 VBP1P61758 197 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 LSM3P62310 102 aaKnown RBP8.53□□□□□ -1.04
CDH3-206ENST00000567674 GPR107Q5VW38 600 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 SPSB3Q6PJ21 355 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 GTSCR1Q86UQ5 136 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 VKORC1L1Q8N0U8 176 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 TMEM56Q96MV1 263 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 RSRP1Q9BUV0 290 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 ZMAT4Q9H898 229 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 PALMDQ9NP74 551 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 TMEM140Q9NV12 185 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 C19orf73Q9NVV2 129 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 FBXL7Q9UJT9 491 aa8.53□□□□□ -1.04
CDH3-206ENST00000567674 ANKRD34BA5PLL1 514 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 A8MWP6 167 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 C3orf84H3BNL1 204 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 TNFSF12O43508 249 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 SNAPC5O75971 98 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 IFNA6P05013 189 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 EIF4EP06730 217 aaKnown RBP8.52□□□□□ -1.05
CDH3-206ENST00000567674 SERPINE2P07093 398 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 TRAPPC2P0DI81 140 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 TRAPPC2BP0DI82 140 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 NCS1P62166 190 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 OR2B11Q5JQS5 317 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 Q8N1Y9 231 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 ZFAND1Q8TCF1 268 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 LSM10Q969L4 123 aaKnown RBP8.52□□□□□ -1.05
CDH3-206ENST00000567674 ZC4H2Q9NQZ6 224 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 NDUFA4L2Q9NRX3 87 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 CACFD1Q9UGQ2 172 aa8.52□□□□□ -1.05
CDH3-206ENST00000567674 TRAV25A0A0B4J276 109 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 IGLC7A0M8Q6 106 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 HMX3A6NHT5 357 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 E7EUB6 86 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 INS-IGF2F8WCM5 200 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 OR2J3O76001 311 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 PMP2P02689 132 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 PTHLHP12272 177 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 MYOD1P15172 320 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 ELK1P19419 428 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 FCGR2BP31994 310 aaPredicted RBP8.51□□□□□ -1.05
CDH3-206ENST00000567674 TGFBR1P36897 503 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 ALDH3B2P48448 385 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 TMBIM6P55061 237 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 ANKRD55Q3KP44 614 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 ZNF585BQ52M93 769 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 C10orf55Q5SWW7 151 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 GDPD1Q8N9F7 314 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 OR51H1Q8NH63 302 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 RAB2BQ8WUD1 216 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 THAP7Q9BT49 309 aaPredicted RBP8.51□□□□□ -1.05
CDH3-206ENST00000567674 TMEM14BQ9NUH8 114 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 MTFP1Q9UDX5 166 aa8.51□□□□□ -1.05
CDH3-206ENST00000567674 TEX50A0A1B0GTY4 177 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms