RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ZNF785A8K8V0 405 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 LGALS9O00182 355 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 S1PR2O95136 353 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 OR2C1O95371 312 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 IGHV3-23P01764 117 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 REG1AP05451 166 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 RFX2P48378 723 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 CD300EQ496F6 205 aaPredicted RBP11.84□□□□□ -0.51
CDH3-204ENST00000565453 CASC10Q5T4H9 136 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 OR51H1Q8NH63 302 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 MOB3AQ96BX8 217 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 CITED4Q96RK1 184 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 PLEKHA2Q9HB19 425 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 HRASLSQ9HDD0 168 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 S4R3C0 116 aa11.84□□□□□ -0.51
CDH3-204ENST00000565453 TNFAIP8O95379 198 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 DHFRP00374 187 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 FGF2P09038 288 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
CDH3-204ENST00000565453 HERV-K104P61576 105 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 HAGHQ16775 308 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 DEFB114Q30KQ6 69 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 TMEM69Q5SWH9 247 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 AADACL3Q5VUY0 350 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 GTSCR1Q86UQ5 136 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 GPHB5Q86YW7 130 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 CD300LFQ8TDQ1 290 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 SLC25A46Q96AG3 418 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 ZNF2Q9BSG1 426 aaPredicted RBP11.83□□□□□ -0.52
CDH3-204ENST00000565453 FXYD6Q9H0Q3 95 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 ZC4H2Q9NQZ6 224 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
CDH3-204ENST00000565453 MFSD2BA6NFX1 497 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
CDH3-204ENST00000565453 PMP2P02689 132 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 EIF4EP06730 217 aaKnown RBP11.82□□□□□ -0.52
CDH3-204ENST00000565453 FOLR2P14207 255 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 ARL3P36405 182 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 LINC00322Q6ZN03 302 aaPredicted RBP11.82□□□□□ -0.52
CDH3-204ENST00000565453 LYSMD2Q8IV50 215 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 LAX1Q8IWV1 398 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 BORCS5Q969J3 196 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
CDH3-204ENST00000565453 SRSF8Q9BRL6 282 aaKnown RBP11.82□□□□□ -0.52
CDH3-204ENST00000565453 A8MWP6 167 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 PRSS3P35030 304 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 TAS2R46P59540 309 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 NCS1P62166 190 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 OR5H2Q8NGV7 314 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 GPX8Q8TED1 209 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 DYNLRB2Q8TF09 96 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
CDH3-204ENST00000565453 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 TMEM213A2RRL7 107 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 RLN1P04808 185 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 CD7P09564 240 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 DEFA4P12838 97 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 RPA2P15927 270 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 F2RP25116 425 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 CD81P60033 236 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 ZNF585BQ52M93 769 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 CADM3Q8N126 398 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 DMBX1Q8NFW5 382 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 OR10W1Q8NGF6 305 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 ZNF502Q8TBZ5 544 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 CACNG8Q8WXS5 425 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 CMTM3Q96MX0 182 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 NEURL2Q9BR09 285 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 FUNDC2Q9BWH2 189 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 QTRT1Q9BXR0 403 aaKnown RBP11.8□□□□□ -0.52
CDH3-204ENST00000565453 COMMD5Q9GZQ3 224 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 PLEKHA3Q9HB20 300 aa11.8□□□□□ -0.52
CDH3-204ENST00000565453 TECRQ9NZ01 308 aaKnown RBP11.8□□□□□ -0.52
CDH3-204ENST00000565453 TEX50A0A1B0GTY4 177 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 CLEC3BP05452 202 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 CBLN1P23435 193 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 HRH1P35367 487 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 LPAR6P43657 344 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 WT1-ASQ06250 92 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 THOC7Q6I9Y2 204 aaKnown RBP11.79□□□□□ -0.52
CDH3-204ENST00000565453 OR6F1Q8NGZ6 308 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 FCAMRQ8WWV6 532 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 DGCR14Q96DF8 476 aaKnown RBP11.79□□□□□ -0.52
CDH3-204ENST00000565453 WDR89Q96FK6 387 aaPredicted RBP11.79□□□□□ -0.52
CDH3-204ENST00000565453 CXorf58Q96LI9 332 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 COMMD3Q9UBI1 195 aa11.79□□□□□ -0.52
CDH3-204ENST00000565453 DYNC2H1Q8NCM8 4307 aaKnown RBP11.79□□□□□ -0.52
CDH3-204ENST00000565453 GPR31O00270 319 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 APOA1P02647 267 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 LYL1P12980 280 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 PTBP1P26599 531 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDH3-204ENST00000565453 HLA-DMAP28067 261 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 VBP1P61758 197 aa11.78□□□□□ -0.52
CDH3-204ENST00000565453 FAM106AQ4KMX7 169 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms