RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 TRBV9A0A0B4J1U6 114 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 S1PR2O95136 353 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 RLN1P04808 185 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 CSN3P07498 182 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 IL6RP08887 468 aaPredicted RBP14.07□□□□□ -0.16
CLN6-204ENST00000564752 ZNF735P0CB33 412 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 NQO2P16083 231 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 HLA-GP17693 338 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 RCVRNP35243 200 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 ATP5G2Q06055 141 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 RPEL1Q2QD12 228 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 NECAP1Q8NC96 275 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 PLEKHA2Q9HB19 425 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 SLC2A9Q9NRM0 540 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 SIGLEC8Q9NYZ4 499 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 COMMD9Q9P000 198 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 ADAM30Q9UKF2 790 aa14.07□□□□□ -0.16
CLN6-204ENST00000564752 NPIPB5A8MRT5 1133 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 OR2J3O76001 311 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 POU2AF1Q16633 256 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 TATDN3Q17R31 274 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 GPR141Q7Z602 305 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 CMTM1Q8IZ96 169 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 DMBX1Q8NFW5 382 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 THAP7Q9BT49 309 aaPredicted RBP14.06□□□□□ -0.16
CLN6-204ENST00000564752 TMEM140Q9NV12 185 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 DNAH1Q9P2D7 4330 aa14.06□□□□□ -0.16
CLN6-204ENST00000564752 A0A1B0GW64 132 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 E7EUB6 86 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 GPR31O00270 319 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 DHFRP00374 187 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 MYOD1P15172 320 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 AREGP15514 252 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 ZNF182P17025 639 aaPredicted RBP14.05□□□□□ -0.16
CLN6-204ENST00000564752 ERVK-16P61578 105 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 TSPAN5P62079 268 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 C15orf32Q32M92 178 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 C19orf35Q6ZS72 473 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 LYSMD2Q8IV50 215 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 EDA2RQ9HAV5 297 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 PALMDQ9NP74 551 aa14.05□□□□□ -0.16
CLN6-204ENST00000564752 UPK2O00526 184 aa14.04□□□□□ -0.16
CLN6-204ENST00000564752 PGLYRP1O75594 196 aaPredicted RBP14.04□□□□□ -0.16
CLN6-204ENST00000564752 F2RP25116 425 aa14.04□□□□□ -0.16
CLN6-204ENST00000564752 PSMB6P28072 239 aa14.04□□□□□ -0.16
CLN6-204ENST00000564752 MECP2P51608 486 aaKnown RBP14.04□□□□□ -0.16
CLN6-204ENST00000564752 RNASE12Q5GAN4 147 aaKnown RBP14.04□□□□□ -0.16
CLN6-204ENST00000564752 FAM209BQ5JX69 171 aa14.04□□□□□ -0.16
CLN6-204ENST00000564752 COMMD5Q9GZQ3 224 aa14.04□□□□□ -0.16
CLN6-204ENST00000564752 FBXL7Q9UJT9 491 aa14.04□□□□□ -0.16
CLN6-204ENST00000564752 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.03□□□□□ -0.16
CLN6-204ENST00000564752 BMPR1BO00238 502 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 RPA2P15927 270 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 S100GP29377 79 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 ALDH3B2P48448 385 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 HAGHQ16775 308 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 PHLDA2Q53GA4 152 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 LCN12Q6JVE5 192 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 Q8N402 240 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 DGCR14Q96DF8 476 aaKnown RBP14.03□□□□□ -0.16
CLN6-204ENST00000564752 SPATA25Q9BR10 227 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 EXTL2Q9UBQ6 330 aa14.03□□□□□ -0.16
CLN6-204ENST00000564752 TRAV3A0A0B4J244 114 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 IZUMO1RA6ND01 250 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 MARCH11A6NNE9 402 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 REG1AP05451 166 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 CRYGCP07315 174 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 FGF2P09038 288 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 DEFA4P12838 97 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 CTRB1P17538 263 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 OR2B8PP59922 312 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 ZFAND6Q6FIF0 208 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 CTRB2Q6GPI1 263 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 LPCAT3Q6P1A2 487 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 GTSCR1Q86UQ5 136 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 ISOC1Q96CN7 298 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 GAR1Q9NY12 217 aaKnown RBP14.02□□□□□ -0.17
CLN6-204ENST00000564752 PEMTQ9UBM1 199 aa14.02□□□□□ -0.17
CLN6-204ENST00000564752 CGB1A6NKQ9 187 aa14.01□□□□□ -0.17
CLN6-204ENST00000564752 HIST1H1BP16401 226 aaKnown RBP14.01□□□□□ -0.17
CLN6-204ENST00000564752 LPAR6P43657 344 aa14.01□□□□□ -0.17
CLN6-204ENST00000564752 OR2K2Q8NGT1 345 aa14.01□□□□□ -0.17
CLN6-204ENST00000564752 FCAMRQ8WWV6 532 aa14.01□□□□□ -0.17
CLN6-204ENST00000564752 FANCD2OSQ96PS1 177 aa14.01□□□□□ -0.17
CLN6-204ENST00000564752 QTRT1Q9BXR0 403 aaKnown RBP14.01□□□□□ -0.17
CLN6-204ENST00000564752 TUBA4BQ9H853 241 aa14.01□□□□□ -0.17
CLN6-204ENST00000564752 EPPK1P58107 5090 aaKnown RBP14.01□□□□□ -0.17
CLN6-204ENST00000564752 LCE6AA0A183 80 aa14□□□□□ -0.17
CLN6-204ENST00000564752 IGLC7A0M8Q6 106 aa14□□□□□ -0.17
CLN6-204ENST00000564752 M0QYG6 137 aa14□□□□□ -0.17
CLN6-204ENST00000564752 NDUFB8O95169 186 aa14□□□□□ -0.17
CLN6-204ENST00000564752 THOC7Q6I9Y2 204 aaKnown RBP14□□□□□ -0.17
CLN6-204ENST00000564752 CLVS1Q8IUQ0 354 aaPredicted RBP14□□□□□ -0.17
CLN6-204ENST00000564752 SLC38A6Q8IZM9 456 aa14□□□□□ -0.17
CLN6-204ENST00000564752 EEF1AKMT3Q96AZ1 226 aa14□□□□□ -0.17
CLN6-204ENST00000564752 SRSF8Q9BRL6 282 aaKnown RBP14□□□□□ -0.17
CLN6-204ENST00000564752 PPP5D1E7EU14 171 aa13.99□□□□□ -0.17
CLN6-204ENST00000564752 RGS5O15539 181 aa13.99□□□□□ -0.17
CLN6-204ENST00000564752 KRASP01116 189 aa13.99□□□□□ -0.17
CLN6-204ENST00000564752 IGHV3-23P01764 117 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms