RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 HOXA6P31267 233 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 ZNF80P51504 273 aaPredicted RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 TPI1P60174 286 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 FABP9Q0Z7S8 132 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 IAH1Q2TAA2 248 aaPredicted RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 ACOT6Q3I5F7 207 aaPredicted RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 GLT8D1Q68CQ7 371 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 Q6ZRN7 208 aaPredicted RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 RASSF6Q6ZTQ3 369 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 SSX8Q7RTT4 187 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 RPP25LQ8N5L8 163 aaKnown RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 OR13C4Q8NGS5 318 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 OR13C8Q8NGS7 320 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 RNASE11Q8TAA1 199 aaKnown RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 PARD6GQ9BYG4 376 aaPredicted RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 SLC22A13Q9Y226 551 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 RBM7Q9Y580 266 aaKnown RBP0.81□□□□□ -2.28
CHD9-211ENST00000564600 PXMP4Q9Y6I8 212 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 PTPRBP23467 1997 aa0.81□□□□□ -2.28
CHD9-211ENST00000564600 DENND4BO75064 1496 aaPredicted RBP0.8□□□□□ -2.28
CHD9-211ENST00000564600 DOCK10Q96BY6 2186 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 CPAMD8Q8IZJ3 1885 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 IGHV1-18A0A0C4DH31 117 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 TMEM269A0A1B0GVZ9 245 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 EVPLLA8MZ36 301 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 EEF1E1-BLOC1S5C9J1V9 151 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 H7C2G1 150 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 NSA2O95478 260 aaKnown RBP0.8□□□□□ -2.28
CHD9-211ENST00000564600 HAND1O96004 215 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 TTRP02766 147 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 IGKV1-16P04430 117 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 NFYAP23511 347 aaPredicted RBP0.8□□□□□ -2.28
CHD9-211ENST00000564600 PEBP1P30086 187 aaKnown RBP0.8□□□□□ -2.28
CHD9-211ENST00000564600 FXYD2P54710 66 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 PSME3P61289 254 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 GLO1Q04760 184 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 PRDX4Q13162 271 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 RSU1Q15404 277 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 GUK1Q16774 197 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 AKIRIN2Q53H80 203 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 IBA57Q5T440 356 aaKnown RBP0.8□□□□□ -2.28
CHD9-211ENST00000564600 TMEM42Q69YG0 159 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 Q6ZS49 121 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 C20orf196Q8IYI0 205 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 MRPL30Q8TCC3 161 aaKnown RBP0.8□□□□□ -2.28
CHD9-211ENST00000564600 CNBD2Q96M20 576 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 HSPB9Q9BQS6 159 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 TIMM21Q9BVV7 248 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 VCX3BQ9H321 246 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 MRPL27Q9P0M9 148 aaKnown RBP0.8□□□□□ -2.28
CHD9-211ENST00000564600 VPS29Q9UBQ0 182 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 CCDC88CQ9P219 2028 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 COL4A1P02462 1669 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 RALGAPA2Q2PPJ7 1873 aa0.8□□□□□ -2.28
CHD9-211ENST00000564600 MAST2Q6P0Q8 1798 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 TMSB15BA0A087X1C1 80 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 MDFIC2A0A1B0GVS7 189 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 IRGMA1A4Y4 181 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 INMT-MINDY4F8WBC2 141 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 GOLGA6L19H0YKK7 550 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 NOS1APO75052 506 aaPredicted RBP0.79□□□□□ -2.28
CHD9-211ENST00000564600 LGALS1P09382 135 aaKnown RBP0.79□□□□□ -2.28
CHD9-211ENST00000564600 CTXN2P0C2S0 81 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 CD79AP11912 226 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 KCNE1P15382 129 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 ANP32AP39687 249 aaKnown RBP0.79□□□□□ -2.28
CHD9-211ENST00000564600 MAP2K4P45985 399 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 OMPP47874 163 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 REG1BP48304 166 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 CEBPGP53567 150 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 RAB14P61106 215 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 ERVS71-1P61550 626 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 HIST1H3AP68431 136 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 H3F3AP84243 136 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 IFITM2Q01629 132 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 FADDQ13158 208 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 HES1Q14469 280 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 SAPCD1Q5SSQ6 148 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 SPOPLQ6IQ16 392 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 HIST2H3AQ71DI3 136 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 SLC35E3Q7Z769 313 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 OR6V1Q8N148 313 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 C12orf45Q8N5I9 185 aaPredicted RBP0.79□□□□□ -2.28
CHD9-211ENST00000564600 ZNF565Q8N9K5 539 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 C12orf43Q96C57 262 aaKnown RBP0.79□□□□□ -2.28
CHD9-211ENST00000564600 TSPAN32Q96QS1 320 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 OR52B2Q96RD2 323 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 NMNAT3Q96T66 252 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 NIPSNAP1Q9BPW8 284 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 EVC2Q86UK5 1308 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 GREB1Q4ZG55 1949 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 PKD1L2Q7Z442 2459 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 CACNA1AO00555 2505 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 NOTCH1P46531 2555 aa0.79□□□□□ -2.28
CHD9-211ENST00000564600 TRBV10-2A0A0K0K1G8 114 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 VPS37CA5D8V6 355 aaPredicted RBP0.78□□□□□ -2.28
CHD9-211ENST00000564600 CLDN24A6NM45 220 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 FNDC10F2Z333 226 aa0.78□□□□□ -2.28
CHD9-211ENST00000564600 LEPROTO15243 131 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms