RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 HSPE1P61604 102 aaKnown RBP16.42■□□□□ 0.22
MSLN-205ENST00000563941 ZNF788Q6ZQV5 615 aa16.42■□□□□ 0.22
MSLN-205ENST00000563941 LSM4Q9Y4Z0 139 aaKnown RBP16.42■□□□□ 0.22
MSLN-205ENST00000563941 ZNF729A6NN14 1252 aaPredicted RBP16.42■□□□□ 0.22
MSLN-205ENST00000563941 STAG3L2P0CL84 134 aa16.42■□□□□ 0.22
MSLN-205ENST00000563941 STAG3L3P0CL85 134 aa16.42■□□□□ 0.22
MSLN-205ENST00000563941 ARSJQ5FYB0 599 aaPredicted RBP16.42■□□□□ 0.22
MSLN-205ENST00000563941 OR5T1Q8NG75 326 aa16.42■□□□□ 0.22
MSLN-205ENST00000563941 SSMEM1Q8WWF3 244 aa16.42■□□□□ 0.22
MSLN-205ENST00000563941 ENY2Q9NPA8 101 aa16.42■□□□□ 0.22
MSLN-205ENST00000563941 DYSFO75923 2080 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 PPP5D1E7EU14 171 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 MMP23AO75900 390 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 CLEC12BQ2HXU8 276 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 PCGF1Q9BSM1 259 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 DCAF16Q9NXF7 216 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 ICE1Q9Y2F5 2266 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 MUC6Q6W4X9 2439 aa16.41■□□□□ 0.22
MSLN-205ENST00000563941 A0A1W2PPQ1 181 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 F6UZH7 168 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 TM4SF5O14894 197 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 NDUFB4O95168 129 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 CXorf1O96002 111 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 MYOD1P15172 320 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 CCKARP32238 428 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 KRTCAP3Q53RY4 240 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 LINC01551Q86U37 167 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 ZCCHC14Q8WYQ9 949 aaKnown RBP16.4■□□□□ 0.22
MSLN-205ENST00000563941 DERL1Q9BUN8 251 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 LINC00574Q9H8X3 128 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 PITPNC1Q9UKF7 332 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 LAMA5O15230 3695 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 KLK10O43240 276 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 CA2P00918 260 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 IL6RP08887 468 aaPredicted RBP16.4■□□□□ 0.22
MSLN-205ENST00000563941 IRF2P14316 349 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 NBL1P41271 181 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 POU2AF1Q16633 256 aa16.4■□□□□ 0.22
MSLN-205ENST00000563941 SNRNP40Q96DI7 357 aaKnown RBP16.4■□□□□ 0.22
MSLN-205ENST00000563941 TMPRSS2O15393 492 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 FABP4P15090 132 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 SRP14P37108 136 aaKnown RBP16.39■□□□□ 0.21
MSLN-205ENST00000563941 TEX36Q5VZQ5 186 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 CDPF1Q6NVV7 123 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 TEPPQ6URK8 271 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 NUP37Q8NFH4 326 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 CORO2AQ92828 525 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 HINT2Q9BX68 163 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 RPUSD1Q9UJJ7 312 aaKnown RBP16.39■□□□□ 0.21
MSLN-205ENST00000563941 OR51B2Q9Y5P1 312 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 PLCE1Q9P212 2302 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 YLPM1P49750 1951 aaKnown RBP16.39■□□□□ 0.21
MSLN-205ENST00000563941 GGCTO75223 188 aaKnown RBP16.39■□□□□ 0.21
MSLN-205ENST00000563941 CHRNA7P36544 502 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 OR2T10Q8NGZ9 312 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 DMRT1Q9Y5R6 373 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 GVINP1Q7Z2Y8 2422 aa16.39■□□□□ 0.21
MSLN-205ENST00000563941 FAM3BP58499 235 aaPredicted RBP16.38■□□□□ 0.21
MSLN-205ENST00000563941 TMEM30BQ3MIR4 351 aa16.38■□□□□ 0.21
MSLN-205ENST00000563941 SLC25A48Q6ZT89 311 aaKnown RBP16.38■□□□□ 0.21
MSLN-205ENST00000563941 STPG3Q8N7X2 389 aa16.38■□□□□ 0.21
MSLN-205ENST00000563941 TXNDC17Q9BRA2 123 aa16.38■□□□□ 0.21
MSLN-205ENST00000563941 AURKAIP1Q9NWT8 199 aaPredicted RBP16.38■□□□□ 0.21
MSLN-205ENST00000563941 CCL8P80075 99 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 TMEM108Q6UXF1 575 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 ZNRD1Q9P1U0 126 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 PRNDQ9UKY0 176 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 CT45A6P0DMU7 189 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 CT45A5P0DMU8 189 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 CT45A7P0DMV0 189 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 EFNB3Q15768 340 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 KCNIP4Q6PIL6 250 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 SLC35D1Q9NTN3 355 aa16.37■□□□□ 0.21
MSLN-205ENST00000563941 CEP250Q9BV73 2442 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 hADV38S2A0JD32 116 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 CD99P14209 185 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 NDUFB7P17568 137 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 RTL8BQ17RB0 113 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 TMEM183AQ8IXX5 376 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 HIST1H2BLQ99880 126 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 TMEM204Q9BSN7 226 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 SEPSECSQ9HD40 501 aaKnown RBP16.36■□□□□ 0.21
MSLN-205ENST00000563941 TRAV20A0A0B4J274 112 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 J3QR06 171 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 UPK2O00526 184 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 IGKV1-16P04430 117 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 RPL29P47914 159 aaKnown RBP16.36■□□□□ 0.21
MSLN-205ENST00000563941 RAB31Q13636 194 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 SPATA31B1PQ5VZV4 182 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 ZNF114Q8NC26 417 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 PLEKHA3Q9HB20 300 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 ZNF257Q9Y2Q1 563 aa16.36■□□□□ 0.21
MSLN-205ENST00000563941 A0A0G2JNJ9 132 aa16.35■□□□□ 0.21
MSLN-205ENST00000563941 PGPEP1LA6NFU8 196 aa16.35■□□□□ 0.21
MSLN-205ENST00000563941 NKX6-3A6NJ46 265 aa16.35■□□□□ 0.21
MSLN-205ENST00000563941 TYMSP04818 313 aa16.35■□□□□ 0.21
MSLN-205ENST00000563941 C1QTNF9P0C862 333 aa16.35■□□□□ 0.21
MSLN-205ENST00000563941 IGFBP2P18065 325 aa16.35■□□□□ 0.21
MSLN-205ENST00000563941 GCHFRP30047 84 aa16.35■□□□□ 0.21
MSLN-205ENST00000563941 RHOBP62745 196 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms