RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 RGPD8O14715 1765 aaPredicted RBP2.92□□□□□ -1.94
GDE1-202ENST00000563645 STRCQ7RTU9 1775 aa2.92□□□□□ -1.94
GDE1-202ENST00000563645 RGPD5Q99666 1765 aa2.92□□□□□ -1.94
GDE1-202ENST00000563645 TOPAZ1Q8N9V7 1692 aa2.92□□□□□ -1.94
GDE1-202ENST00000563645 HCFC1P51610 2035 aa2.92□□□□□ -1.94
GDE1-202ENST00000563645 NCKAP5O14513 1909 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CEP170Q5SW79 1584 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 NUP153P49790 1475 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 PHRF1Q9P1Y6 1649 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 IGLV4-3A0A075B6K6 122 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CEACAM18A8MTB9 384 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 ZNF727A8MUV8 499 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 SHISA9B4DS77 424 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 FNDC10F2Z333 226 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 NPFFO15130 113 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 RER1O15258 196 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 EFNA2O43921 213 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 MPDU1O75352 247 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 PGLYRP1O75594 196 aaPredicted RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 REM1O75628 298 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CYB5AP00167 134 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CD8AP01732 235 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CATP04040 527 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 REG1AP05451 166 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 SCTP09683 121 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TACSTD2P09758 323 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TPT1P13693 172 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 CD99P14209 185 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CPMP14384 443 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 FCARP24071 287 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TNFSF9P41273 254 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 NDUFV3P56181 108 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 CLDN6P56747 220 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TPPP2P59282 170 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TAS2R19P59542 299 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 FKBP1BP68106 108 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 MRPS6P82932 125 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 ZNF92Q03936 586 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CD164Q04900 197 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 DIAPH2-AS1Q14236 149 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CCL15Q16663 113 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 BVES-AS1Q5T3Y7 98 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 ATP1A1-AS1Q5TC04 95 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 C1orf189Q5VU69 101 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 OR4C11Q6IEV9 310 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 MRPL54Q6P161 138 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 HRCT1Q6UXD1 115 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TIFABQ6ZNK6 161 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 Q6ZUT4 128 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 LRP11Q86VZ4 500 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 OOSP2Q86WS3 158 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TGIF2LYQ8IUE0 185 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TMEM86AQ8N2M4 240 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TCEANCQ8N8B7 351 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 OR2M3Q8NG83 312 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 OR10D3Q8NH80 312 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 OR51E1Q8TCB6 317 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 MBD3L1Q8WWY6 194 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 RDH5Q92781 318 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 TMEM54Q969K7 222 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 PPCDCQ96CD2 204 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 NUS1Q96E22 293 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 C1orf147Q96MC9 270 aaPredicted RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 DEFB118Q96PH6 123 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 FAM173AQ9BQD7 235 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 PRADC1Q9BSG0 188 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 SFXN3Q9BWM7 321 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 GGTLC1Q9BX51 225 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 MRPL32Q9BYC8 188 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 GABARAPL1Q9H0R8 117 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 PARP11Q9NR21 331 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 AIG1Q9NVV5 245 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 CCDC167Q9P0B6 97 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 YTHDF2Q9Y5A9 579 aaKnown RBP2.91□□□□□ -1.94
GDE1-202ENST00000563645 ATAD5Q96QE3 1844 aa2.91□□□□□ -1.94
GDE1-202ENST00000563645 ANKRD31Q8N7Z5 1873 aa2.9□□□□□ -1.94
GDE1-202ENST00000563645 PLIN4Q96Q06 1357 aa2.9□□□□□ -1.94
GDE1-202ENST00000563645 CPS1P31327 1500 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 TRGV10A0A0A0MS01 117 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 IGHV3-20A0A0C4DH32 117 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 FAM231BA6NCW3 169 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 NAP1L6A6NFF2 107 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 H3BRM9 83 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 M0R1X1 148 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 CREBL2O60519 120 aaPredicted RBP2.9□□□□□ -1.95
GDE1-202ENST00000563645 ZNF354AO60765 605 aaPredicted RBP2.9□□□□□ -1.95
GDE1-202ENST00000563645 C1orf105O95561 183 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 PTHP01270 115 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 IGKV3-15P01624 115 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 IGF1P05019 195 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 GPX1P07203 203 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 KRTAP1-4P0C5Y4 121 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 SEC11BP0C7V7 166 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 IGLC6P0CF74 106 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 SLC25A6P12236 298 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 ZNF708P17019 499 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 BCL3P20749 454 aa2.9□□□□□ -1.95
GDE1-202ENST00000563645 RPS4Y1P22090 263 aaKnown RBP2.9□□□□□ -1.95
GDE1-202ENST00000563645 EDNRAP25101 427 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms