RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FREM3P0C091 2139 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 PROB1E7EW31 1015 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 CDKN3Q16667 212 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 FAM222BQ8WU58 562 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 PRELID3AQ96N28 172 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 HSPE1P61604 102 aaKnown RBP5.34□□□□□ -1.55
CLK3-212ENST00000563418 OR10X1Q8NGY0 326 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 NAT6Q93015 286 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 KCNK17Q96T54 332 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 PYGO2Q9BRQ0 406 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 SNAI2O43623 268 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 LILRA1O75019 489 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 SUPT4H1P63272 117 aaKnown RBP5.34□□□□□ -1.56
CLK3-212ENST00000563418 PLAURQ03405 335 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 TSACCQ96A04 125 aaPredicted RBP5.34□□□□□ -1.56
CLK3-212ENST00000563418 DYNLRB1Q9NP97 96 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 TNFRSF19Q9NS68 423 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 ZNF355PQ9NSJ1 428 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 TRAV8-6A0A0B4J262 113 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 EDDM3AQ14507 147 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 ATXN8Q156A1 80 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 SRSF7Q16629 238 aaKnown RBP eCLIP5.34□□□□□ -1.56
CLK3-212ENST00000563418 RPRMLQ8N4K4 120 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 GPR82Q96P67 336 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 NPFFR1Q9GZQ6 430 aa5.34□□□□□ -1.56
CLK3-212ENST00000563418 NXT2Q9NPJ8 142 aaKnown RBP5.34□□□□□ -1.56
CLK3-212ENST00000563418 DXOO77932 396 aaKnown RBP5.33□□□□□ -1.56
CLK3-212ENST00000563418 CIRBPQ14011 172 aaKnown RBP5.33□□□□□ -1.56
CLK3-212ENST00000563418 ZNF818PQ6ZRF7 136 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 SLC25A48Q6ZT89 311 aaKnown RBP5.33□□□□□ -1.56
CLK3-212ENST00000563418 IGKCP01834 107 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 VGLL1Q99990 258 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 PLNP26678 52 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 SSR4P51571 173 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 CLLU1OSQ5K130 101 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 MIC13Q5XKP0 118 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 SLC23A3Q6PIS1 610 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 PLXNA3P51805 1871 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 ZNF688P0C7X2 276 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 S100A4P26447 101 aaKnown RBP5.33□□□□□ -1.56
CLK3-212ENST00000563418 RAXQ9Y2V3 346 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 FAM90A9PA6NNJ1 464 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 ZNF658BQ4V348 819 aaPredicted RBP5.33□□□□□ -1.56
CLK3-212ENST00000563418 S100A7L2Q5SY68 101 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 LRRC29Q8WV35 223 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 SIGLEC8Q9NYZ4 499 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 MYO9BQ13459 2157 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 IGLV1-36A0A0B4J1U3 117 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 C5orf49A4QMS7 147 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 SP9P0CG40 484 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 ZNF83P51522 516 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 PIGYQ3MUY2 71 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 KMT2EQ8IZD2 1858 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 NTN1O95631 604 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 DNAL4O96015 105 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 Q6ZNB5 142 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 MOB3BQ86TA1 216 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 PPP1R27Q86WC6 154 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 TMEFF1Q8IYR6 380 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 FGFRL1Q8N441 504 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 C8orf44Q96CB5 159 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 PHF7Q9BWX1 381 aaPredicted RBP5.33□□□□□ -1.56
CLK3-212ENST00000563418 GP6Q9HCN6 339 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 FOXH1O75593 365 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 SPSB3Q6PJ21 355 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 WFDC8Q8IUA0 241 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 GDF1P27539 372 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 CDAP32320 146 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 FGF12P61328 243 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 TM4SF20Q53R12 229 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 DRAM1Q8N682 238 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 CLEC7AQ9BXN2 247 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 GFRA4Q9GZZ7 299 aa5.33□□□□□ -1.56
CLK3-212ENST00000563418 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.32□□□□□ -1.56
CLK3-212ENST00000563418 CA6P23280 308 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 CIARTQ8N365 385 aaPredicted RBP5.32□□□□□ -1.56
CLK3-212ENST00000563418 BRCA1P38398 1863 aaKnown RBP5.32□□□□□ -1.56
CLK3-212ENST00000563418 TRACP01848 142 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 HOXA4Q00056 320 aaPredicted RBP5.32□□□□□ -1.56
CLK3-212ENST00000563418 HCFC1R1Q9NWW0 138 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 A0A1B0GX78 115 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 YPEL1O60688 119 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 IGFBP2P18065 325 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 FOXA3P55318 350 aaPredicted RBP5.32□□□□□ -1.56
CLK3-212ENST00000563418 YPEL2Q96QA6 119 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 PEX7O00628 323 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 ATP5G3P48201 142 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 ZNF415Q09FC8 603 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 OR4A5Q8NH83 315 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 ZNF319Q9P2F9 582 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 SCN5AQ14524 2016 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 CHAC1Q9BUX1 264 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 TMEM160Q9NX00 188 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 CRIM1Q9NZV1 1036 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 ERG28Q9UKR5 140 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 TRBV7-9A0A0J9YWB2 115 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 H7C2G1 150 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 RRHO14718 337 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 TNFRSF6BO95407 300 aa5.32□□□□□ -1.56
CLK3-212ENST00000563418 SRYQ05066 204 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms