RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZNF79Q15937 498 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 SSX2Q16385 188 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 LRRC75BQ2VPJ9 315 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GAGE2EQ4V326 116 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 TMEM69Q5SWH9 247 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GAGE2AQ6NT46 116 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 BEST4Q8NFU0 473 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 OR6Q1Q8NGQ2 317 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 MCFD2Q8NI22 146 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 SETD6Q8TBK2 473 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 ZNF418Q8TF45 676 aaPredicted RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 ZFAND2BQ8WV99 257 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 RTN4IP1Q8WWV3 396 aaPredicted RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 MRGPRFQ96AM1 343 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GALMQ96C23 342 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 SDHCQ99643 169 aaPredicted RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 SSX3Q99909 188 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 DCUN1D5Q9BTE7 237 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 MMP27Q9H306 513 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 CHMP1AQ9HD42 196 aaPredicted RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 RDH8Q9NYR8 311 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 KCNIP1Q9NZI2 227 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GNG12Q9UBI6 72 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 GAGE2DQ9UEU5 116 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 VPREB3Q9UKI3 123 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 RBMX2Q9Y388 322 aaKnown RBP3.55□□□□□ -1.84
SMG1-206ENST00000562668 HILPDAQ9Y5L2 63 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 C2CD3Q4AC94 2353 aa3.55□□□□□ -1.84
SMG1-206ENST00000562668 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 IGHV1-3A0A0C4DH29 117 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 TMEM89A2RUT3 159 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 A8MZ25 164 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 H3BUX3 64 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 SULT1C2O00338 296 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 TOR1AO14656 332 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 HSD17B6O14756 317 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 GSTZ1O43708 216 aaPredicted RBP3.54□□□□□ -1.84
SMG1-206ENST00000562668 CD74P04233 296 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 FCER2P06734 321 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 ZNF735P0CB33 412 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CT45A6P0DMU7 189 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CT45A5P0DMU8 189 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CT45A7P0DMV0 189 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 NFYAP23511 347 aaPredicted RBP3.54□□□□□ -1.84
SMG1-206ENST00000562668 ZBTB25P24278 435 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CD24P25063 80 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 PRSS3P35030 304 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 SOX6P35712 828 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 TALDO1P37837 337 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CEACAM6P40199 344 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CBX5P45973 191 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 REG1BP48304 166 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 RAB7AP51149 207 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 SCGB2A2Q13296 93 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CNPY1Q3B7I2 92 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 RPL39P5Q59GN2 51 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 FAM71F2Q6NXP2 309 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 DHRS11Q6UWP2 260 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 LHFPL1Q86WI0 220 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 SNX29P2Q8IUI4 249 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 DRAM1Q8N682 238 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 ZNF383Q8NA42 475 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 OR5AP2Q8NGF4 316 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 SSMEM1Q8WWF3 244 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 IL1F10Q8WWZ1 152 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 CREB3L1Q96BA8 519 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 ABHD14BQ96IU4 210 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 NABP2Q9BQ15 211 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 ST6GALNAC5Q9BVH7 336 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 MRPL20Q9BYC9 149 aaKnown RBP3.54□□□□□ -1.84
SMG1-206ENST00000562668 C6orf62Q9GZU0 229 aaPredicted RBP3.54□□□□□ -1.84
SMG1-206ENST00000562668 SDHAF2Q9NX18 166 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 KLK11Q9UBX7 282 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 MTFP1Q9UDX5 166 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 JMJD1CQ15652 2540 aa3.54□□□□□ -1.84
SMG1-206ENST00000562668 ATRQ13535 2644 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 CCDC160A6NGH7 325 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 FAM25AB3EWG3 89 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 FAM25CB3EWG5 89 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 FAM25GB3EWG6 89 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 H0YJW9 148 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 GABARAPH6UMI1 98 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 TRIM77I1YAP6 450 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 RAB29O14966 203 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 BET1O15155 118 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 NOL3O60936 208 aaKnown RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 TSPAN9O75954 239 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 NDUFA7O95182 113 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 GAPDHP04406 335 aaKnown RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 CTXN2P0C2S0 81 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR8U9P0C7N5 309 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 OR5H8P0DN80 308 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 AADACP22760 399 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 PTBP1P26599 531 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMG1-206ENST00000562668 CD1BP29016 333 aa3.53□□□□□ -1.84
SMG1-206ENST00000562668 DUTP33316 252 aaKnown RBP3.53□□□□□ -1.84
SMG1-206ENST00000562668 CEACAM3P40198 252 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms