RNA–Protein interactions for RNA: ENST00000561898.1

NPTN-203, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-203ENST00000561898 COMMD7Q86VX2 200 aa0.67□□□□□ -2.3
NPTN-203ENST00000561898 OR1M1Q8NGA1 313 aa0.67□□□□□ -2.3
NPTN-203ENST00000561898 ANKRD7Q92527 254 aa0.67□□□□□ -2.3
NPTN-203ENST00000561898 UPF3BQ9BZI7 483 aaKnown RBP0.67□□□□□ -2.3
NPTN-203ENST00000561898 MAP1LC3AQ9H492 121 aa0.67□□□□□ -2.3
NPTN-203ENST00000561898 RSL24D1Q9UHA3 163 aaKnown RBP0.67□□□□□ -2.3
NPTN-203ENST00000561898 COQ4Q9Y3A0 265 aa0.67□□□□□ -2.3
NPTN-203ENST00000561898 TRAV14DV4A0A0A6YYC5 116 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 TRBV10-2A0A0K0K1G8 114 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 GGT3PA6NGU5 568 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 F5H768 121 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 NOS1APO75052 506 aaPredicted RBP0.66□□□□□ -2.3
NPTN-203ENST00000561898 PMP2P02689 132 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 METTL15P1P0C7V9 234 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 KCNE1P15382 129 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 NFYAP23511 347 aaPredicted RBP0.66□□□□□ -2.3
NPTN-203ENST00000561898 PSMB6P28072 239 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 PRB3Q04118 309 aaPredicted RBP0.66□□□□□ -2.3
NPTN-203ENST00000561898 MGAT3Q09327 533 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 TMED1Q13445 227 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 RSU1Q15404 277 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 DEFB115Q30KQ5 88 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 TNFAIP8L3Q5GJ75 292 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 DHFR2Q86XF0 187 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 Q8N2B8 174 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 LINC00471Q8N535 108 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 C9orf163Q8N9P6 203 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 REG4Q9BYZ8 158 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 YIPF3Q9GZM5 350 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 OR51I2Q9H344 312 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 PAQR5Q9NXK6 330 aaPredicted RBP0.66□□□□□ -2.3
NPTN-203ENST00000561898 FREM1Q5H8C1 2179 aa0.66□□□□□ -2.3
NPTN-203ENST00000561898 RAD50Q92878 1312 aa0.65□□□□□ -2.3
NPTN-203ENST00000561898 TMEM212A6NML5 194 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 OR4C45A6NMZ5 311 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 HLA-DRAP01903 254 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 APOEP02649 317 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 SRP19P09132 144 aaKnown RBP0.65□□□□□ -2.31
NPTN-203ENST00000561898 BLVRAP53004 296 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 FXYD2P54710 66 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 CTAG1AP78358 180 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 CLEC6AQ6EIG7 209 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 C10orf67Q8IYJ2 551 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 C12orf29Q8N999 325 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 TMEM161BQ8NDZ6 487 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 WFDC11Q8NEX6 87 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 DIRAS2Q96HU8 199 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 CFAP53Q96M91 514 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 OR8D2Q9GZM6 311 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 PLEKHJ1Q9NW61 149 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 OR5AC2Q9NZP5 309 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 BAIAP2Q9UQB8 552 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 KIF15Q9NS87 1388 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 CCDC88CQ9P219 2028 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 SCAF11Q99590 1463 aaKnown RBP0.65□□□□□ -2.31
NPTN-203ENST00000561898 THSD7AQ9UPZ6 1657 aa0.65□□□□□ -2.31
NPTN-203ENST00000561898 BAZ2BQ9UIF8 2168 aaKnown RBP0.64□□□□□ -2.31
NPTN-203ENST00000561898 C1orf232A0A0U1RR37 186 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 TRAPPC2LH3BP13 241 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 LST1O00453 97 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 GEMIN2O14893 280 aaKnown RBP0.64□□□□□ -2.31
NPTN-203ENST00000561898 YEATS4O95619 227 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 IGHV3-7P01780 117 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 RPL12P30050 165 aaKnown RBP0.64□□□□□ -2.31
NPTN-203ENST00000561898 RUNX1Q01196 453 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 CAV1Q03135 178 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 RPL18Q07020 188 aaKnown RBP0.64□□□□□ -2.31
NPTN-203ENST00000561898 ZNF345Q14585 488 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 AAED1Q7RTV5 226 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 FAM9CQ8IZT9 166 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 FAM19A2Q8N3H0 131 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 ROPN1LQ96C74 230 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 MRPL57Q9BQC6 102 aaKnown RBP0.64□□□□□ -2.31
NPTN-203ENST00000561898 DRC3Q9H069 523 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 TRABDQ9H4I3 376 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 FUT9Q9Y231 359 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 C22orf24Q9Y442 160 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 GMEB1Q9Y692 573 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 LHFPL6Q9Y693 200 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
NPTN-203ENST00000561898 KIF24Q5T7B8 1368 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 TONSLQ96HA7 1378 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 IRGMA1A4Y4 181 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 M0QX08 132 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 COCHO43405 550 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 HCRTO43612 131 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 FAM228BP0C875 321 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 RPS4Y1P22090 263 aaKnown RBP0.63□□□□□ -2.31
NPTN-203ENST00000561898 MAP2K4P45985 399 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 TNFAIP6P98066 277 aaPredicted RBP0.63□□□□□ -2.31
NPTN-203ENST00000561898 C10orf55Q5SWW7 151 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 GLT8D1Q68CQ7 371 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.63□□□□□ -2.31
NPTN-203ENST00000561898 ZNF565Q8N9K5 539 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 TMEM106AQ96A25 262 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 HDHD2Q9H0R4 259 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 FGFR1OP2Q9NVK5 253 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 NOTCH1P46531 2555 aa0.63□□□□□ -2.31
NPTN-203ENST00000561898 CHD2O14647 1828 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms