RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 PSMB6P28072 239 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 SDC2P34741 201 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 ARL3P36405 182 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 GABARAPL2P60520 117 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 SFXN4Q6P4A7 337 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 GPHB5Q86YW7 130 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 GVQW1Q8N7I0 195 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 OR5H6Q8NGV6 325 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 VSTM2AQ8TAG5 236 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 SECTM1Q8WVN6 248 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 RHBDL2Q9NX52 303 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 MLXQ9UH92 298 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 RAB26Q9ULW5 256 aa8.74□□□□□ -1.01
USP3-220ENST00000561381 TRAV3A0A0B4J244 114 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 TMEM213A2RRL7 107 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 MFSD2BA6NFX1 497 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 CTRB1P17538 263 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 FCGR2CP31995 323 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 MAS1LP35410 378 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 RPL8P62917 257 aaKnown RBP8.73□□□□□ -1.01
USP3-220ENST00000561381 MXD1Q05195 221 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 CTRB2Q6GPI1 263 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 OR4A47Q6IF82 309 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 ZNF773Q6PK81 442 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 ZNF66Q6ZN08 573 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 TPRA1Q86W33 373 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 BEST4Q8NFU0 473 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 OR13F1Q8NGS4 319 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 SLC25A38Q96DW6 304 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 TECRQ9NZ01 308 aaKnown RBP8.73□□□□□ -1.01
USP3-220ENST00000561381 SSR3Q9UNL2 185 aa8.73□□□□□ -1.01
USP3-220ENST00000561381 IGLV11-55A0A075B6I3 123 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 TRAV18A0A075B6X5 111 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 SULT1C2O00338 296 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 MRPS14O60783 128 aaKnown RBP8.72□□□□□ -1.01
USP3-220ENST00000561381 SCGNO76038 276 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 SCAF4O95104 1147 aaKnown RBP8.72□□□□□ -1.01
USP3-220ENST00000561381 HRASP01112 189 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 HLA-GP17693 338 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 OR2B8PP59922 312 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 ARPC4P59998 168 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 KLK9Q2XQG4 91 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 TIMM50Q3ZCQ8 353 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 ZNF57Q68EA5 555 aaPredicted RBP8.72□□□□□ -1.01
USP3-220ENST00000561381 UNQ9165/PRO28630Q6UXU0 137 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 SPAG16Q8N0X2 631 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 UXS1Q8NBZ7 420 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 EEF1AKMT3Q96AZ1 226 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 HRASLSQ9HDD0 168 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 KLK9Q9UKQ9 250 aa8.72□□□□□ -1.01
USP3-220ENST00000561381 PLECQ15149 4684 aaKnown RBP8.72□□□□□ -1.01
USP3-220ENST00000561381 IGHV3-35A0A0C4DH35 117 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 PPYP01298 95 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 CLEC3BP05452 202 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 DEFA4P12838 97 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 FXYD4P59646 89 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 FAM106AQ4KMX7 169 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 TM4SF20Q53R12 229 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 IDNKQ5T6J7 187 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 BTNL8Q6UX41 500 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 HOGA1Q86XE5 327 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 FCGR1BQ92637 280 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 SLC5A7Q9GZV3 580 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 BET1LQ9NYM9 111 aa8.71□□□□□ -1.02
USP3-220ENST00000561381 LOC100506127A0A0U1RQW1 187 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 SCO2A0A1W2PP80 73 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 IGLC7A0M8Q6 106 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 MEIS3P1A6NDR6 274 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 A8MWP6 167 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 UPK2O00526 184 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 DHFRP00374 187 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 RPA2P15927 270 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 HIST1H1BP16401 226 aaKnown RBP8.7□□□□□ -1.02
USP3-220ENST00000561381 GPR183P32249 361 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 SLC16A13Q7RTY0 426 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 OR52B4Q8NGK2 314 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 OR51H1Q8NH63 302 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 OR4A5Q8NH83 315 aa8.7□□□□□ -1.02
USP3-220ENST00000561381 TRBV7-1A0A0A6YYK4 115 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.02
USP3-220ENST00000561381 JTBO76095 146 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 S1PR2O95136 353 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 MSMO1Q15800 293 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 ZNF585BQ52M93 769 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 ZNF818PQ6ZRF7 136 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 TMEM17Q86X19 198 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 ZBTB34Q8NCN2 500 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 OR10W1Q8NGF6 305 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 ZNF502Q8TBZ5 544 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 CXorf58Q96LI9 332 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 AUNIPQ9H7T9 357 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 TMEM140Q9NV12 185 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 ETV7Q9Y603 341 aa8.69□□□□□ -1.02
USP3-220ENST00000561381 HPRT1P00492 218 aa8.68□□□□□ -1.02
USP3-220ENST00000561381 C8orf88P0DMB2 117 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms