RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 BLOC1S1P78537 153 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 PAX8Q06710 450 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 SPINK9Q5DT21 86 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 LILRB2Q8N423 598 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 HSD17B11Q8NBQ5 300 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 TBX15Q96SF7 602 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 TMEM147Q9BVK8 224 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 GGACTQ9BVM4 153 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 COMMD5Q9GZQ3 224 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 PLEKHA3Q9HB20 300 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 LPAR2Q9HBW0 351 aa13.8□□□□□ -0.2
HDDC3-206ENST00000561036 NUDT19A8MXV4 375 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 UMAD1C9J7I0 102 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 TRIM77I1YAP6 450 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 IFNA10P01566 189 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 CRYGBP07316 175 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 ATP6V0CP27449 155 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 MAS1LP35410 378 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 VWC2Q2TAL6 325 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 LDLRAD2Q5SZI1 272 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 OR8G2PQ6IF36 304 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 SLC25A24Q6NUK1 477 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 CXorf58Q96LI9 332 aa13.79□□□□□ -0.2
HDDC3-206ENST00000561036 SPTAN1Q13813 2472 aaKnown RBP13.78□□□□□ -0.2
HDDC3-206ENST00000561036 IGHV3-72A0A0B4J1Y9 119 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 A0A1W2PN81 502 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 ZNF705EA8MWA4 302 aaPredicted RBP13.78□□□□□ -0.2
HDDC3-206ENST00000561036 TIMM23O14925 209 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 CHRNA7P36544 502 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 PSG5Q15238 335 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 CLEC12BQ2HXU8 276 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 LRRC75BQ2VPJ9 315 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 THNSL2Q86YJ6 484 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 LRRC75A-AS1Q8N1F1 130 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 CFHR4Q92496 578 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 NRGNQ92686 78 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 ZNF430Q9H8G1 570 aaPredicted RBP13.78□□□□□ -0.2
HDDC3-206ENST00000561036 NDUFA4L2Q9NRX3 87 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 UQCC1Q9NVA1 299 aa13.78□□□□□ -0.2
HDDC3-206ENST00000561036 SLC25A17O43808 307 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 VENTXO95231 258 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 NPY1RP25929 384 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 F2RL1P55085 397 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 PRSS8Q16651 343 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 MRPL41Q8IXM3 137 aaKnown RBP13.77□□□□□ -0.21
HDDC3-206ENST00000561036 EIF4E3Q8N5X7 224 aaKnown RBP13.77□□□□□ -0.21
HDDC3-206ENST00000561036 SLC24A4Q8NFF2 622 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 OR2G3Q8NGZ4 309 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 MALSU1Q96EH3 234 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 RITA1Q96K30 269 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 PSMG3Q9BT73 122 aaPredicted RBP13.77□□□□□ -0.21
HDDC3-206ENST00000561036 WDR61Q9GZS3 305 aaKnown RBP13.77□□□□□ -0.21
HDDC3-206ENST00000561036 SH3BGRL3Q9H299 93 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 PARP11Q9NR21 331 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 PLA2G2EQ9NZK7 142 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 TIMM9Q9Y5J7 89 aa13.77□□□□□ -0.21
HDDC3-206ENST00000561036 MFSD2BA6NFX1 497 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 COL8A1P27658 744 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 DLK1P80370 383 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 ETV3LQ6ZN32 361 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 HSD17B13Q7Z5P4 300 aaPredicted RBP13.76□□□□□ -0.21
HDDC3-206ENST00000561036 LHFPL4Q7Z7J7 247 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 CITED4Q96RK1 184 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 HINT2Q9BX68 163 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 SIGLEC9Q9Y336 463 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 HILPDAQ9Y5L2 63 aa13.76□□□□□ -0.21
HDDC3-206ENST00000561036 FNDC10F2Z333 226 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 RRHO14718 337 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 MOSP00540 346 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 ERHP84090 104 aaKnown RBP13.75□□□□□ -0.21
HDDC3-206ENST00000561036 MRGPRG-AS1Q2M3A8 158 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 BSXQ3C1V8 233 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 C2orf83Q53S99 150 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 DPPA3Q6W0C5 159 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 CENPVQ7Z7K6 275 aaPredicted RBP13.75□□□□□ -0.21
HDDC3-206ENST00000561036 NPBQ8NG41 125 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 OR2T10Q8NGZ9 312 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDDC3-206ENST00000561036 RBMXL1Q96E39 390 aaKnown RBP13.75□□□□□ -0.21
HDDC3-206ENST00000561036 REG4Q9BYZ8 158 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 DCHS2Q6V1P9 2916 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 ARHGAP32A7KAX9 2087 aa13.75□□□□□ -0.21
HDDC3-206ENST00000561036 B4DSR2 109 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 PRSS46E5RG02 174 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 CA2P00918 260 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 MSMBP08118 114 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 MYOD1P15172 320 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 MDKP21741 143 aaPredicted RBP13.74□□□□□ -0.21
HDDC3-206ENST00000561036 GATA3P23771 443 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 SERF2P84101 59 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 EBI3Q14213 229 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 SSX2Q16385 188 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 DEFB113Q30KQ7 82 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 TMEM170AQ8WVE7 144 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 MARC2Q969Z3 335 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
HDDC3-206ENST00000561036 METTL1Q9UBP6 276 aaKnown RBP13.74□□□□□ -0.21
HDDC3-206ENST00000561036 TET2Q6N021 2002 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms