RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 WDR73Q6P4I2 378 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 CXorf67Q86X51 503 aaPredicted RBP13.69□□□□□ -0.22
TPM1-228ENST00000560975 TAAR6Q96RI8 345 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 HELTA6NFD8 242 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 CBY3A6NI87 242 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 K7EP13 123 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 KLF7O75840 302 aaPredicted RBP13.69□□□□□ -0.22
TPM1-228ENST00000560975 CA1P00915 261 aaPredicted RBP13.69□□□□□ -0.22
TPM1-228ENST00000560975 EFNB3Q15768 340 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 PRAMEF5Q5TYX0 476 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 PRAMEF6Q5VXH4 476 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 ZNF784Q8NCA9 323 aaPredicted RBP13.69□□□□□ -0.22
TPM1-228ENST00000560975 ST6GALNAC6Q969X2 333 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 TRGV10A0A0A0MS01 117 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 MMP23AO75900 390 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 MGST1P10620 155 aaKnown RBP13.69□□□□□ -0.22
TPM1-228ENST00000560975 PRR31Q5SQ13 230 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
TPM1-228ENST00000560975 HCFC1P51610 2035 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 SAA2-SAA4A0A096LPE2 208 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 IGHV2OR16-5A0A0B4J2B6 119 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 TMEM30CPA0ZSE6 113 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 C9JCJ5 164 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 FCGR3BO75015 233 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 HAND1O96004 215 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 MT-ND6P03923 174 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 SSTR5P35346 364 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 GABRA2P47869 451 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 RTL8AQ9BWD3 113 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 WNT9BO14905 357 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 MPDU1O75352 247 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 OR4A16Q8NH70 328 aa13.68□□□□□ -0.22
TPM1-228ENST00000560975 IGHV3-13P01766 116 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 IGHV3-7P01780 117 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 NRN1LQ496H8 165 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 MIR17HGQ75NE6 70 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 STPG3Q8N7X2 389 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 WDR54Q9H977 334 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 GCM1Q9NP62 436 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 MRPS16Q9Y3D3 137 aaKnown RBP13.67□□□□□ -0.22
TPM1-228ENST00000560975 TRAV3A0A0B4J244 114 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 APCSP02743 223 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 TNFSF4P23510 183 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 RPL19P84098 196 aaKnown RBP13.67□□□□□ -0.22
TPM1-228ENST00000560975 NHLRC2Q8NBF2 726 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 TMEM45BQ96B21 275 aa13.67□□□□□ -0.22
TPM1-228ENST00000560975 IGHV2-26A0A0B4J1V2 119 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 AMY1AP04745 511 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 CELA3AP09093 270 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 RHOBP62745 196 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 PSG5Q15238 335 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 ZNF826PQ6ZT77 177 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 C11orf52Q96A22 123 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 C1orf159Q96HA4 380 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 CCL4P13236 92 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 IGLL1P15814 213 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 ARR3P36575 388 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 ERVK11-1P61568 191 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 SLAQ13239 276 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 TNXAQ16473 311 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 SMRP1Q8NCR6 262 aa13.66□□□□□ -0.22
TPM1-228ENST00000560975 SSBP3Q9BWW4 388 aaPredicted RBP13.66□□□□□ -0.22
TPM1-228ENST00000560975 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 MT-CO2P00403 227 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 USF1P22415 310 aaPredicted RBP13.65□□□□□ -0.22
TPM1-228ENST00000560975 S100A7P31151 101 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 C19orf35Q6ZS72 473 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 VPS25Q9BRG1 176 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 DCTN5Q9BTE1 182 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 POLDIP2Q9Y2S7 368 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 AHRRA9YTQ3 701 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 TIGITQ495A1 244 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 C12orf49Q9H741 205 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 CEP192Q8TEP8 1941 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 LY6G6EA0A0G2JKS1 128 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 IGLC7A0M8Q6 106 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 HSBP1O75506 76 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 FOXF2Q12947 444 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 ZNF146Q15072 292 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 EBLN2Q6P2I7 272 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 Q6ZR03 302 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 C18orf32Q8TCD1 76 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 U3KQA8 63 aa13.65□□□□□ -0.22
TPM1-228ENST00000560975 PI4KAP42356 2102 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 TET2Q6N021 2002 aaPredicted RBP13.64□□□□□ -0.23
TPM1-228ENST00000560975 OOEPA6NGQ2 149 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 M0R2Z0 102 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 C3AR1Q16581 482 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 Q8IYB0 196 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 GCNT2Q8N0V5 402 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 FAM216AQ8WUB2 273 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 FAM122AQ96E09 287 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 LINC00470Q9BZP3 86 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 TRAV9-2A0A087WT02 112 aa13.64□□□□□ -0.23
TPM1-228ENST00000560975 LOC102724200A0A096LPH7 203 aaPredicted RBP13.64□□□□□ -0.23
TPM1-228ENST00000560975 GFRA3O60609 400 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms