RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 KLK9Q2XQG4 91 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 ANKRD55Q3KP44 614 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 DHRS11Q6UWP2 260 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 IL34Q6ZMJ4 242 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 HAPLN4Q86UW8 402 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 GPHB5Q86YW7 130 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 CADM3Q8N126 398 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 Q8N1Y9 231 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 OR6F1Q8NGZ6 308 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 OR51H1Q8NH63 302 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 AP3S1Q92572 193 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 MARC2Q969Z3 335 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 MOB3AQ96BX8 217 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 TM2D3Q9BRN9 247 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 FUNDC2Q9BWH2 189 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 QTRT1Q9BXR0 403 aaKnown RBP10.72□□□□□ -0.69
TPM1-223ENST00000560445 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 FKBP11Q9NYL4 201 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 ADAM30Q9UKF2 790 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 KLK9Q9UKQ9 250 aa10.72□□□□□ -0.69
TPM1-223ENST00000560445 SNAPC5O75971 98 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 APOA1P02647 267 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 FCER2P06734 321 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 IL6RP08887 468 aaPredicted RBP10.71□□□□□ -0.69
TPM1-223ENST00000560445 LYL1P12980 280 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 CTRB1P17538 263 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 F2RP25116 425 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 TGFBR1P36897 503 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 OR2B8PP59922 312 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 CTRB2Q6GPI1 263 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 NBEAL2Q6ZNJ1 2754 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 SLC16A13Q7RTY0 426 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 OR1L6Q8NGR2 347 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 CITED4Q96RK1 184 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 ATP6V0BQ99437 205 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 TSC22D3Q99576 134 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 TMEM140Q9NV12 185 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 COMMD3Q9UBI1 195 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 ANAPC10Q9UM13 185 aa10.71□□□□□ -0.69
TPM1-223ENST00000560445 MEIS3P1A6NDR6 274 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 UPK2O00526 184 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 PTHLHP12272 177 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 RORCP51449 518 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 TSPAN5P62079 268 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 MZT2AQ6P582 158 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 ZNF818PQ6ZRF7 136 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 IL17DQ8TAD2 202 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 C15orf40Q8WUR7 153 aa10.7□□□□□ -0.7
TPM1-223ENST00000560445 ZNF2Q9BSG1 426 aaPredicted RBP10.7□□□□□ -0.7
TPM1-223ENST00000560445 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
TPM1-223ENST00000560445 GAR1Q9NY12 217 aaKnown RBP10.7□□□□□ -0.7
TPM1-223ENST00000560445 IGLV11-55A0A075B6I3 123 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 A8MWP6 167 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 GPR31O00270 319 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 RLN1P04808 185 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 TRAPPC2P0DI81 140 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 TRAPPC2BP0DI82 140 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 FOLR2P14207 255 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 MYOD1P15172 320 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 AREGP15514 252 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 NAT1P18440 290 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 RCVRNP35243 200 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 MECP2P51608 486 aaKnown RBP10.69□□□□□ -0.7
TPM1-223ENST00000560445 BRWD1-AS2P59051 145 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 CD81P60033 236 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 VBP1P61758 197 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 NCS1P62166 190 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 CLEC19AQ6UXS0 136 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 GDPD1Q8N9F7 314 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 OR1L8Q8NGR8 309 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 VN1R17PQ8TDU5 208 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 LSM10Q969L4 123 aaKnown RBP10.69□□□□□ -0.7
TPM1-223ENST00000560445 DGCR14Q96DF8 476 aaKnown RBP10.69□□□□□ -0.7
TPM1-223ENST00000560445 TMEM56Q96MV1 263 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 PRNDQ9UKY0 176 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
TPM1-223ENST00000560445 ZNF320A2RRD8 509 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 PPP5D1E7EU14 171 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 RBMXL2O75526 392 aaKnown RBP10.68□□□□□ -0.7
TPM1-223ENST00000560445 S1PR2O95136 353 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 PMP2P02689 132 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 PTBP1P26599 531 aaKnown RBP eCLIP10.68□□□□□ -0.77e-7■■■□□ 17
TPM1-223ENST00000560445 GNRHRP30968 328 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 RFX2P48378 723 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 ELLP55199 621 aaPredicted RBP10.68□□□□□ -0.7
TPM1-223ENST00000560445 GUCA2BQ16661 112 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 CD300EQ496F6 205 aaPredicted RBP10.68□□□□□ -0.7
TPM1-223ENST00000560445 ZNF57Q68EA5 555 aaPredicted RBP10.68□□□□□ -0.7
TPM1-223ENST00000560445 OR5B3Q8NH48 314 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 FANCD2OSQ96PS1 177 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 NEURL2Q9BR09 285 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 THAP7Q9BT49 309 aaPredicted RBP10.68□□□□□ -0.7
TPM1-223ENST00000560445 ZC4H2Q9NQZ6 224 aa10.68□□□□□ -0.7
TPM1-223ENST00000560445 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
TPM1-223ENST00000560445 IGLC7A0M8Q6 106 aa10.67□□□□□ -0.7
TPM1-223ENST00000560445 PGLYRP1O75594 196 aaPredicted RBP10.67□□□□□ -0.7
TPM1-223ENST00000560445 ATG12O94817 140 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms