RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 HERPUD1Q15011 391 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 MIC13Q5XKP0 118 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 CD59P13987 128 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 LHX2P50458 406 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 PSG9Q00887 426 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 ZNF146Q15072 292 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 FUT9Q9Y231 359 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 NDUFB4O95168 129 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 OR5AC2Q9NZP5 309 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 ACAA1P09110 424 aaPredicted RBP11.44□□□□□ -0.58
TRAF3-208ENST00000560371 C1QTNF12Q5T7M4 302 aa11.44□□□□□ -0.58
TRAF3-208ENST00000560371 PEAR1Q5VY43 1037 aaPredicted RBP11.43□□□□□ -0.58
TRAF3-208ENST00000560371 DRAM1Q8N682 238 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 FAM131CQ96AQ9 280 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 GPR146Q96CH1 333 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 SMDT1Q9H4I9 107 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 TGFBR3LH3BV60 316 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 IGKV1D-33P01593 117 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 IGKV1-33P01594 117 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 KBTBD11O94819 623 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 BCL2P10415 239 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 OR4X2Q8NGF9 303 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 GALNT14Q96FL9 552 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 TUBD1Q9UJT1 453 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 ELOA3CA0A087WX78 387 aaPredicted RBP11.43□□□□□ -0.58
TRAF3-208ENST00000560371 P2RY4P51582 365 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 PRO1933Q9H354 126 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 SORL1Q92673 2214 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 E9PLN8 166 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 ZG16O60844 167 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 IL4P05112 153 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 CDKN1AP38936 164 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 WDFY1Q8IWB7 410 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 VKORC1Q9BQB6 163 aa11.43□□□□□ -0.58
TRAF3-208ENST00000560371 DLX6P56179 175 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 FAM201AQ5SY85 155 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
TRAF3-208ENST00000560371 C7orf77A4D0Y5 90 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
TRAF3-208ENST00000560371 CX3CL1P78423 397 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 C8orf88P0DMB2 117 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 SNRPEP62304 92 aaKnown RBP11.42□□□□□ -0.58
TRAF3-208ENST00000560371 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
TRAF3-208ENST00000560371 DMRTA2Q96SC8 542 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.42□□□□□ -0.58
TRAF3-208ENST00000560371 CELA3BP08861 270 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 NPIPB3Q92617 1050 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 JMJD8Q96S16 334 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 CBLN4Q9NTU7 201 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 EFEMP2O95967 443 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 MEF2BQ02080 365 aaPredicted RBP11.42□□□□□ -0.58
TRAF3-208ENST00000560371 COL5A1-AS1Q5SY13 56 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 TXNDC17Q9BRA2 123 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 ZIC4Q8N9L1 334 aa11.42□□□□□ -0.58
TRAF3-208ENST00000560371 CYB561D1Q8N8Q1 229 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 OR13C6PQ8NH95 151 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.41□□□□□ -0.58
TRAF3-208ENST00000560371 AP4M1O00189 453 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 ASPHD2Q6ICH7 369 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 SLC16A13Q7RTY0 426 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 LOC102723996A0A087X1L8 192 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 CD81P60033 236 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 RPL39P5Q59GN2 51 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 FAM159AQ6UWV7 190 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 ZNF818PQ6ZRF7 136 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
TRAF3-208ENST00000560371 FBXL15Q9H469 300 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 ARL14EPLP0DKL9 152 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 OR51M1Q9H341 326 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 CUL9Q8IWT3 2517 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 NMUP48645 174 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 C5orf66Q9H5L9 145 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 PIN1P1O15428 100 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 HKR1P10072 659 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 CD99P14209 185 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 ATP5IP56385 69 aaPredicted RBP11.41□□□□□ -0.58
TRAF3-208ENST00000560371 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
TRAF3-208ENST00000560371 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 TP53RKQ96S44 253 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 PLXNA3P51805 1871 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 CD300CQ08708 224 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 CD200R1LQ6Q8B3 271 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 CRIPAKQ8N1N5 446 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 NPFFR1Q9GZQ6 430 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 GCSAMLQ5JQS6 135 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 SIGIRRQ6IA17 410 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 POC1AQ8NBT0 407 aa11.4□□□□□ -0.58
TRAF3-208ENST00000560371 OSR1Q8TAX0 266 aaPredicted RBP11.4□□□□□ -0.58
TRAF3-208ENST00000560371 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.58
TRAF3-208ENST00000560371 IGHV3OR16-13A0A075B7E8 117 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms