RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 FAM24BQ8N5W8 94 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 RNASE6Q93091 150 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 GGACTQ9BVM4 153 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 TMEM106BQ9NUM4 274 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 C1orf196B1AJZ1 125 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 RRHO14718 337 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 DMRTC2Q8IXT2 367 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 Q8N7P7 452 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 C2CD4CQ8TF44 421 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 CCL17Q92583 94 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 TMEM14BQ9NUH8 114 aa11.85□□□□□ -0.51
RABGGTA-212ENST00000559974 PRSS46E5RG02 174 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 E7EQL1 145 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 NDUFA2O43678 99 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 MPDU1O75352 247 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 CT45A6P0DMU7 189 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 CT45A5P0DMU8 189 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 CT45A7P0DMV0 189 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 RAB5AP20339 215 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 MAS1LP35410 378 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 DYNLRB1Q9NP97 96 aa11.84□□□□□ -0.51
RABGGTA-212ENST00000559974 TNCP24821 2201 aa11.83□□□□□ -0.51
RABGGTA-212ENST00000559974 hCG_1809904A0A1W2PP81 198 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 A0A1W2PR64 198 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 A0A1W2PRV1 198 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 HMGB3O15347 200 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 SOX15O60248 233 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 FCN3O75636 299 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 RTL8BQ17RB0 113 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 ACOT6Q3I5F7 207 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 HEPN1Q6WQI6 88 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 ABHD12Q8N2K0 398 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 TMEM170AQ8WVE7 144 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 KLF2Q9Y5W3 355 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 SMCO3A2RU48 225 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 B4DEV8 164 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 C19orf84I3L1E1 186 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 TNFRSF13BO14836 293 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 CYB5BO43169 146 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 ERVFRD-1P60508 538 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 PNRC1Q12796 327 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 ZNF833PQ6ZTB9 187 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 NEUROG1Q92886 237 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 RAB24Q969Q5 203 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 TMPRSS5Q9H3S3 457 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 MS4A5Q9H3V2 200 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 ZNRD1Q9P1U0 126 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 PRELID1Q9Y255 219 aa11.83□□□□□ -0.52
RABGGTA-212ENST00000559974 TACC2O95359 2948 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 ZNF727A8MUV8 499 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 NDUFB3O43676 98 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 IFNA4P05014 189 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 CCL3L1P16619 93 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 AGAP20933 346 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 CDC34P49427 236 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 PSMB3P49720 205 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 LRRC10Q5BKY1 277 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 OR13D1Q8NGV5 346 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 MALSU1Q96EH3 234 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 ENY2Q9NPA8 101 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 MANBALQ9NQG1 85 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 SIRT7Q9NRC8 400 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 PRNDQ9UKY0 176 aa11.82□□□□□ -0.52
RABGGTA-212ENST00000559974 IGKV1-16P04430 117 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 IL6RP08887 468 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 NPY1RP25929 384 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 CD81P60033 236 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 LYPD2Q6UXB3 125 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 OR51B2Q9Y5P1 312 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 CELSR2Q9HCU4 2923 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 ANKHD1Q8IWZ3 2542 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 SEC14L6B5MCN3 397 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 CD3EP07766 207 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 APOBEC3AP31941 199 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 OPRK1P41145 380 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 EFNB3Q15768 340 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 H1FXQ92522 213 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 ZNF257Q9Y2Q1 563 aa11.81□□□□□ -0.52
RABGGTA-212ENST00000559974 USP9YO00507 2555 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 UPK2O00526 184 aa11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 NDUFS6O75380 124 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 WDR25Q64LD2 544 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 RAB1CQ92928 201 aa11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 MGST2Q99735 147 aa11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 SDF2L1Q9HCN8 221 aa11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 KAAG1Q9UBP8 84 aa11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 CTSZQ9UBR2 303 aa11.8□□□□□ -0.52
RABGGTA-212ENST00000559974 CENPEQ02224 2701 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms