RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 C19orf35Q6ZS72 473 aa9.65□□□□□ -0.86
LRRC28-214ENST00000559433 CLVS1Q8IUQ0 354 aaPredicted RBP9.65□□□□□ -0.86
LRRC28-214ENST00000559433 NECAP1Q8NC96 275 aa9.65□□□□□ -0.86
LRRC28-214ENST00000559433 TMEM140Q9NV12 185 aa9.65□□□□□ -0.86
LRRC28-214ENST00000559433 COMMD9Q9P000 198 aa9.65□□□□□ -0.86
LRRC28-214ENST00000559433 LSM4Q9Y4Z0 139 aaKnown RBP9.65□□□□□ -0.86
LRRC28-214ENST00000559433 SMAD5-AS1Q9Y6J3 95 aa9.65□□□□□ -0.86
LRRC28-214ENST00000559433 TRAV3A0A0B4J244 114 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 A6NJY4 79 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 UPK2O00526 184 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 DHFRP00374 187 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 RPA2P15927 270 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 F2RP25116 425 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 S100GP29377 79 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 SYNJ2BPP57105 145 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 C15orf32Q32M92 178 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 LPCAT3Q6P1A2 487 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 HAPLN4Q86UW8 402 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 OR9G4Q8NGQ1 327 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 DGCR14Q96DF8 476 aaKnown RBP9.64□□□□□ -0.87
LRRC28-214ENST00000559433 COMMD5Q9GZQ3 224 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 FBXL7Q9UJT9 491 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 DNAH9Q9NYC9 4486 aa9.64□□□□□ -0.87
LRRC28-214ENST00000559433 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 M0QYG6 137 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 RGS5O15539 181 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 REG1AP05451 166 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 CRYGCP07315 174 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 DEFA4P12838 97 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 PSMB6P28072 239 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 LPAR6P43657 344 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 OR2B8PP59922 312 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 FAM209BQ5JX69 171 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 C11orf87Q6NUJ2 197 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 LAX1Q8IWV1 398 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 SLC38A6Q8IZM9 456 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 OR52I2Q8NH67 350 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 RAB2BQ8WUD1 216 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 FCAMRQ8WWV6 532 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 ASCL2Q99929 193 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 KLK11Q9UBX7 282 aa9.63□□□□□ -0.87
LRRC28-214ENST00000559433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.62□□□□□ -0.87
LRRC28-214ENST00000559433 H0Y980 276 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 BMPR1BO00238 502 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
LRRC28-214ENST00000559433 IFNA6P05013 189 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 FGF2P09038 288 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 GP9P14770 177 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 HIST1H1BP16401 226 aaKnown RBP9.62□□□□□ -0.87
LRRC28-214ENST00000559433 CTRB1P17538 263 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 RNASE10Q5GAN6 216 aaKnown RBP9.62□□□□□ -0.87
LRRC28-214ENST00000559433 CTRB2Q6GPI1 263 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 TBC1D26Q86UD7 250 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 C15orf40Q8WUR7 153 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 ABHD1Q96SE0 405 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 MIXL1Q9H2W2 232 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
LRRC28-214ENST00000559433 IGLC7A0M8Q6 106 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 PPP5D1E7EU14 171 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 TPPPO94811 219 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 NDUFB8O95169 186 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 KRASP01116 189 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 IGLV1-51P01701 117 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 IGHV3-23P01764 117 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 CD3DP04234 171 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 PGAM2P15259 253 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 TBPP20226 339 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 G6PCP35575 357 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 TMBIM6P55061 237 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 UCP3P55916 312 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 ZNF585BQ52M93 769 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 FANCD2OSQ96PS1 177 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 BCL7BQ9BQE9 202 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
LRRC28-214ENST00000559433 QTRT1Q9BXR0 403 aaKnown RBP9.61□□□□□ -0.87
LRRC28-214ENST00000559433 CCDC59Q9P031 241 aaKnown RBP9.61□□□□□ -0.87
LRRC28-214ENST00000559433 MTFP1Q9UDX5 166 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 S4R3C0 116 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 U3KQK5 164 aa9.61□□□□□ -0.87
LRRC28-214ENST00000559433 CTDSP2O14595 271 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 CYB5BO43169 146 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 SNAPC5O75971 98 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 CSN3P07498 182 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 TRAPPC2P0DI81 140 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 TRAPPC2BP0DI82 140 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 RPL5P46777 297 aaKnown RBP9.6□□□□□ -0.87
LRRC28-214ENST00000559433 IL34Q6ZMJ4 242 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 SGPP2Q8IWX5 399 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 ARRDC1Q8N5I2 433 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 DYNC2LI1Q8TCX1 351 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 EEF1AKMT3Q96AZ1 226 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 HINT2Q9BX68 163 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 FAM212BQ9NTI7 297 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-214ENST00000559433 NSG2Q9Y328 171 aa9.6□□□□□ -0.87
LRRC28-214ENST00000559433 IGLV11-55A0A075B6I3 123 aa9.59□□□□□ -0.87
LRRC28-214ENST00000559433 TEX50A0A1B0GTY4 177 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms