RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 GABRA4P48169 554 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 TMEM176BQ3YBM2 270 aaPredicted RBP4.91□□□□□ -1.62
CASC4-208ENST00000559151 LRRN1Q6UXK5 716 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 TMEM161BQ8NDZ6 487 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 ANKRD36BP1Q96IX9 119 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 FKBP14Q9NWM8 211 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 SBF1O95248 1867 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 CRYBG1Q9Y4K1 1723 aa4.91□□□□□ -1.62
CASC4-208ENST00000559151 NLRC5Q86WI3 1866 aa4.9□□□□□ -1.62
CASC4-208ENST00000559151 A0A0C4DFX4 3053 aa4.9□□□□□ -1.62
CASC4-208ENST00000559151 C21orf140B9A014 251 aa4.9□□□□□ -1.63
CASC4-208ENST00000559151 RPS12P25398 132 aaKnown RBP4.9□□□□□ -1.63
CASC4-208ENST00000559151 OGFRL1Q5TC84 451 aaPredicted RBP4.9□□□□□ -1.63
CASC4-208ENST00000559151 UCK1Q9HA47 277 aa4.9□□□□□ -1.63
CASC4-208ENST00000559151 N4BP2Q86UW6 1770 aaPredicted RBP4.9□□□□□ -1.63
CASC4-208ENST00000559151 IFT172Q9UG01 1749 aa4.89□□□□□ -1.63
CASC4-208ENST00000559151 C17orf51A8MQB3 221 aa4.89□□□□□ -1.63
CASC4-208ENST00000559151 SNCBQ16143 134 aa4.89□□□□□ -1.63
CASC4-208ENST00000559151 ALS2Q96Q42 1657 aa4.89□□□□□ -1.63
CASC4-208ENST00000559151 ROCK1Q13464 1354 aa4.89□□□□□ -1.63
CASC4-208ENST00000559151 NAIPQ13075 1403 aa4.89□□□□□ -1.63
CASC4-208ENST00000559151 LRRC37A3O60309 1634 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 GRIFINA4D1Z8 144 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 OR11H12B2RN74 326 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 UBE2L6O14933 153 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 TRAPPC3O43617 180 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 ZNF189O75820 626 aaPredicted RBP4.88□□□□□ -1.63
CASC4-208ENST00000559151 HOXA6P31267 233 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 DEFB115Q30KQ5 88 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 SAPCD1Q5SSQ6 148 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 RASSF6Q6ZTQ3 369 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 PACRGLQ8N7B6 248 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 DAND5Q8N907 189 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 OR11H2Q8NH07 326 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 RAB8BQ92930 207 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 TESCQ96BS2 214 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 BABAM2Q9NXR7 383 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 MMACHCQ9Y4U1 282 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 BTAF1O14981 1849 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 BCL9O00512 1426 aa4.88□□□□□ -1.63
CASC4-208ENST00000559151 HLA-DQB2P05538 268 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 KRT7P08729 469 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 DDTP30046 118 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 BTN3A2P78410 334 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 PTRHD1Q6GMV3 140 aaKnown RBP4.87□□□□□ -1.63
CASC4-208ENST00000559151 C2orf91Q6ZV80 131 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 SMIM5Q71RC9 77 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 RPS4Y2Q8TD47 263 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 SZT2Q5T011 3432 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 CCDC88AQ3V6T2 1871 aa4.87□□□□□ -1.63
CASC4-208ENST00000559151 COL6A3P12111 3177 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 OR5K4A6NMS3 321 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 UBFD1O14562 309 aaKnown RBP4.86□□□□□ -1.63
CASC4-208ENST00000559151 ATP5HO75947 161 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 GZMBP10144 247 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 VBP1P61758 197 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 LGALS9CQ6DKI2 356 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 SLC51BQ86UW2 128 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 UBL4BQ8N7F7 174 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 RNASE6Q93091 150 aaKnown RBP4.86□□□□□ -1.63
CASC4-208ENST00000559151 PPP1R14BQ96C90 147 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 NRXN1Q9ULB1 1477 aa4.86□□□□□ -1.63
CASC4-208ENST00000559151 CHD5Q8TDI0 1954 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 OR6C6A6NF89 314 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 CSRP1P21291 193 aaKnown RBP4.85□□□□□ -1.63
CASC4-208ENST00000559151 REG1BP48304 166 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 RSU1Q15404 277 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 C1orf195Q5TG92 126 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 RNF133Q8WVZ7 376 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 CHMP6Q96FZ7 201 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 PSORS1C2Q9UIG4 136 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 NHSQ6T4R5 1651 aa4.85□□□□□ -1.63
CASC4-208ENST00000559151 CUL9Q8IWT3 2517 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 KIAA1551Q9HCM1 1747 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 MDFIC2A0A1B0GVS7 189 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 H3BPC8 53 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 PPP1R2P41236 205 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 COQ5Q5HYK3 327 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 PPP1R2P3Q6NXS1 205 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 SPATA12Q7Z6I5 190 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 STX12Q86Y82 276 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 CNEP1R1Q8N9A8 125 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 STACQ99469 402 aa4.84□□□□□ -1.63
CASC4-208ENST00000559151 ARFGEF1Q9Y6D6 1849 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 PIK3C2AO00443 1686 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 NUP155O75694 1391 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 GOLGA6L19H0YKK7 550 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 IGHV1-69P01742 117 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 ITGB3BPQ13352 177 aaPredicted RBP4.83□□□□□ -1.64
CASC4-208ENST00000559151 SBSNQ6UWP8 590 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 C9orf16Q9BUW7 83 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 DSCAMO60469 2012 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 LMO7Q8WWI1 1683 aa4.83□□□□□ -1.64
CASC4-208ENST00000559151 WNK3Q9BYP7 1800 aa4.82□□□□□ -1.64
CASC4-208ENST00000559151 EVPLLA8MZ36 301 aa4.82□□□□□ -1.64
CASC4-208ENST00000559151 MSNP26038 577 aaKnown RBP4.82□□□□□ -1.64
CASC4-208ENST00000559151 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
CASC4-208ENST00000559151 HOXC5Q00444 222 aa4.82□□□□□ -1.64
CASC4-208ENST00000559151 C1orf194Q5T5A4 169 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms