RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 LIPFP07098 398 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 DUTP33316 252 aaKnown RBP12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 SERF2P84101 59 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 AWAT1Q58HT5 328 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 LILRB2Q8N423 598 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 OR4C12Q96R67 309 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 SMR3AQ99954 134 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 LINC00574Q9H8X3 128 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 HIF1ANQ9NWT6 349 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 CALYQ9NYX4 217 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 COLCA2A8K830 154 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 GPR12P47775 334 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 LINC00205P59089 165 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 RAB2AP61019 212 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 PAX8Q06710 450 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 NCR3LG1Q68D85 454 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 ETV3LQ6ZN32 361 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 TMEM186Q96B77 213 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 ZNF714Q96N38 554 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 RPRMQ9NS64 109 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 GNG12Q9UBI6 72 aa12.87□□□□□ -0.35
CDC42BPB-204ENST00000559043 C7orf77A4D0Y5 90 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 PMS2P5A8MQ11 134 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 ITGB1BP1O14713 200 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 ENSAO43768 121 aaKnown RBP12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 AVPP01185 164 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 LTC4SQ16873 150 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 AARDQ4LEZ3 155 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 PRAMEF5Q5TYX0 476 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 CENPVQ7Z7K6 275 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 SIRPDQ9H106 197 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 RPS10P5Q9NQ39 176 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 GAB2Q9UQC2 676 aa12.86□□□□□ -0.35
CDC42BPB-204ENST00000559043 ZNF729A6NN14 1252 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 HSPB1P04792 205 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 SRP19P09132 144 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 OR13C7P0DN81 318 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 ICAM4Q14773 271 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 ATP6V1FQ16864 119 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 SOHLH1Q5JUK2 328 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 C15orf54Q8N8G6 183 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 RXFP4Q8TDU9 374 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 AIFM2Q9BRQ8 373 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 IFI27L2Q9H2X8 130 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 UNKLQ9H9P5 680 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 TIMM9Q9Y5J7 89 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 FAM90A9PA6NNJ1 464 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 RBFOX2O43251 390 aaKnown RBP eCLIP12.85□□□□□ -0.358e-8■□□□□ 8.6
CDC42BPB-204ENST00000559043 SCAF4O95104 1147 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 HPRT1P00492 218 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 ZNF134P52741 427 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 RHEBQ15382 184 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 CYB5R2Q6BCY4 276 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 C1orf229Q6ZS94 237 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 DTD1Q8TEA8 209 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 TAF15Q92804 592 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 R3HDM4Q96D70 268 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 TMUB1Q9BVT8 246 aa12.85□□□□□ -0.35
CDC42BPB-204ENST00000559043 TRAV20A0A0B4J274 112 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 IGHV3-7P01780 117 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 SNRNP70P08621 437 aaKnown RBP12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 ZNF726P1Q15940 193 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 HAGHQ16775 308 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 KHDC3LQ587J8 217 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 HEPN1Q6WQI6 88 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 LEAP2Q969E1 77 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 PINX1Q96BK5 328 aaKnown RBP12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 CLCC1Q96S66 551 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 TBX15Q96SF7 602 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 RAB9BQ9NP90 201 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 SIRT7Q9NRC8 400 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 MLXQ9UH92 298 aa12.84□□□□□ -0.35
CDC42BPB-204ENST00000559043 M0R036 132 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 CRYBA1P05813 215 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 IGHV1-8P0DP01 117 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 FOLR2P14207 255 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 AKR1C3P42330 323 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 TMEM41BQ5BJD5 291 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 OR8G2PQ6IF36 304 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 HCP5Q6MZN7 132 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 PRELID3BQ9Y3B1 194 aa12.83□□□□□ -0.35
CDC42BPB-204ENST00000559043 MAST4O15021 2626 aa12.83□□□□□ -0.36
CDC42BPB-204ENST00000559043 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
CDC42BPB-204ENST00000559043 VWC2Q2TAL6 325 aa12.83□□□□□ -0.36
CDC42BPB-204ENST00000559043 AKIRIN2Q53H80 203 aa12.83□□□□□ -0.36
CDC42BPB-204ENST00000559043 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
CDC42BPB-204ENST00000559043 TMEM147Q9BVK8 224 aa12.83□□□□□ -0.36
CDC42BPB-204ENST00000559043 GAL3ST2Q9H3Q3 398 aa12.83□□□□□ -0.36
CDC42BPB-204ENST00000559043 IDI2-AS1Q9NZ38 188 aa12.83□□□□□ -0.36
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