RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 FAM25EA8MYX2 175 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 AP4M1O00189 453 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 ATP6V0E1O15342 81 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 ADAP1O75689 374 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 TSPAN9O75954 239 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 NDUFA7O95182 113 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 IFNA17P01571 189 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 IGHG2P01859 326 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 OPN1MWP04001 364 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 FGF2P09038 288 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 P0C879 139 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 OPN1MW2P0DN77 364 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 OPN1MW3P0DN78 364 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 RPL27AP46776 148 aaKnown RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 COMPP49747 757 aaPredicted RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 NDPQ00604 133 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 RELBQ01201 579 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 TMEM267Q0VDI3 215 aaPredicted RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 SMCO1Q147U7 214 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 ECSCRQ19T08 205 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 IZUMO4Q1ZYL8 232 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 TMEM95Q3KNT9 176 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 NMSQ5H8A3 153 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 C10orf55Q5SWW7 151 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 GGNBP1Q5YKI7 109 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 PRIMA1Q86XR5 153 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 MRPL41Q8IXM3 137 aaKnown RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 OR1L8Q8NGR8 309 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 OR5B3Q8NH48 314 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 OR1S1Q8NH92 325 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 SRSF12Q8WXF0 261 aaKnown RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 FYTTD1Q96QD9 318 aaKnown RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 FAM103A1Q9BTL3 118 aaKnown RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 HINT2Q9BX68 163 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 QTRT1Q9BXR0 403 aaKnown RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 FOXA2Q9Y261 457 aaPredicted RBP5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 OR51B2Q9Y5P1 312 aa5.22□□□□□ -1.57
CHRNA3-204ENST00000559002 TRAV41A0A0B4J266 112 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 TEX50A0A1B0GTY4 177 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 A0A1B0GUS0 222 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 C13orf42A0A1B0GVH6 325 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 C5orf51A6NDU8 294 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 CCSO14618 274 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 GOSR2O14653 212 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 IL6RP08887 468 aaPredicted RBP5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 TRAPPC2P0DI81 140 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 TRAPPC2BP0DI82 140 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 HKR1P10072 659 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 SLC25A6P12236 298 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 MYOD1P15172 320 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 HOXA1P49639 335 aaPredicted RBP5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 HSPE1P61604 102 aaKnown RBP5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 SLC35B1P78383 322 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 MRGPRG-AS1Q2M3A8 158 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 IAH1Q2TAA2 248 aaPredicted RBP5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 UNQ5815/PRO19632Q6UWF5 114 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 GSG1LQ6UXU4 331 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 Q6ZS46 218 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 ZNF429Q86V71 674 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 Q8N2B8 174 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 TAF15Q92804 592 aaKnown RBP eCLIP5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 NOL4LQ96MY1 436 aaPredicted RBP5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 GON7Q9BXV9 100 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 MED28Q9H204 178 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 C16orf95Q9H693 158 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 PLEKHA3Q9HB20 300 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 ENY2Q9NPA8 101 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 TMEM14BQ9NUH8 114 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 COA4Q9NYJ1 87 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 CACFD1Q9UGQ2 172 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 LINC00527Q9UJ94 153 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 ZNF257Q9Y2Q1 563 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 WSB1Q9Y6I7 421 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 TENM1Q9UKZ4 2725 aa5.21□□□□□ -1.58
CHRNA3-204ENST00000559002 A0A1W2PN81 502 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 CLPSL1A2RUU4 121 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 PSMB11A5LHX3 300 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 HMX3A6NHT5 357 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 MSGN1A6NI15 193 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 LINC01548A6NM66 108 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 DBX1A6NMT0 343 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 CEBPZOSA8MTT3 80 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 WRBO00258 174 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 ST8SIA3O43173 380 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 NXPH3O95157 252 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 SCGB1D2O95969 90 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 IGF1P05019 195 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 APELAP0DMC3 54 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 MDKP21741 143 aaPredicted RBP5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 CHRNA7P36544 502 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 RIPPLY3P57055 190 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 SPCS3P61009 180 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 SSBP2P81877 361 aaPredicted RBP5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 PRCDQ00LT1 54 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 FOXL1Q12952 345 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 KRTAP24-1Q3LI83 254 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 SPINK9Q5DT21 86 aa5.2□□□□□ -1.58
CHRNA3-204ENST00000559002 Q6ZRM9 215 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 374.6 ms