RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 NDPQ00604 133 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 PSG5Q15238 335 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 CNIH2Q6PI25 160 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 GPR141Q7Z602 305 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 CROCCP3Q8IVE0 287 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 NPBQ8NG41 125 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 FLYWCH2Q96CP2 140 aaKnown RBP7.56□□□□□ -1.2
SPG11-214ENST00000558989 FYTTD1Q96QD9 318 aaKnown RBP7.56□□□□□ -1.2
SPG11-214ENST00000558989 RAB40CQ96S21 281 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 CHRDL1Q9BU40 450 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 DCSTAMPQ9H295 470 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 IFT46Q9NQC8 304 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 CEPT1Q9Y6K0 416 aa7.56□□□□□ -1.2
SPG11-214ENST00000558989 LINC00473A8K010 186 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 FAM25AB3EWG3 89 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 FAM25CB3EWG5 89 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 FAM25GB3EWG6 89 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 TNFSF12O43508 249 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 NDUFA3O95167 84 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 CA2P00918 260 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 IGLL1P15814 213 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 CX3CL1P78423 397 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 DLK1P80370 383 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 IDO2Q6ZQW0 420 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 Q6ZS49 121 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 SNX29P2Q8IUI4 249 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 GRPEL2Q8TAA5 225 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 SECTM1Q8WVN6 248 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 DCUN1D5Q9BTE7 237 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 OR2W1Q9Y3N9 320 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 U3KQE9 123 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 A0A087X0K7 114 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 TRAV41A0A0B4J266 112 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 A0A1W2PPV4 95 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 XRCC3O43542 346 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 CRYZL1O95825 349 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 HLA-DRB1P01911 266 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 APELAP0DMC3 54 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 AADACP22760 399 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 FCGR2CP31995 323 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 THBS3P49746 956 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 BCAP31P51572 246 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 PJVKQ0ZLH3 352 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 CTF1Q16619 201 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 SRSF7Q16629 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
SPG11-214ENST00000558989 HOGA1Q86XE5 327 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 PDPNQ86YL7 162 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 CLVS1Q8IUQ0 354 aaPredicted RBP7.55□□□□□ -1.2
SPG11-214ENST00000558989 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.55□□□□□ -1.2
SPG11-214ENST00000558989 OR4A16Q8NH70 328 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 LRRC20Q8TCA0 184 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 TOLLIPQ9H0E2 274 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 KLK15Q9H2R5 256 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 TAS2R8Q9NYW2 309 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 TBC1D24Q9ULP9 559 aa7.55□□□□□ -1.2
SPG11-214ENST00000558989 LSM4Q9Y4Z0 139 aaKnown RBP7.55□□□□□ -1.2
SPG11-214ENST00000558989 TRAV26-1A0A087WT03 109 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 RBBP9O75884 186 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 CNIH1O95406 144 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 MBP02144 154 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 PMP2P02689 132 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 CTXN2P0C2S0 81 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 ELK1P19419 428 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 DUTP33316 252 aaKnown RBP7.54□□□□□ -1.2
SPG11-214ENST00000558989 RORCP51449 518 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 RTL8BQ17RB0 113 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 TMEM65Q6PI78 240 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 UNQ5815/PRO19632Q6UWF5 114 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 TBC1D26Q86UD7 250 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 TMEM17Q86X19 198 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 ZNF695Q8IW36 515 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 ZNF645Q8N7E2 425 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 LFNGQ8NES3 379 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 OR4C5Q8NGB2 326 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 SNAPC3Q92966 411 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
SPG11-214ENST00000558989 CCL28Q9NRJ3 127 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 NECAP2Q9NVZ3 263 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 RNF24Q9Y225 148 aa7.54□□□□□ -1.2
SPG11-214ENST00000558989 A0A0A6YYH2 397 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 SMIM31A0A1B0GVY4 71 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 A6NJ64 397 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 SRRM4A7MD48 611 aaKnown RBP7.53□□□□□ -1.2
SPG11-214ENST00000558989 GABARAPO95166 117 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 HLA-DQB1P01920 261 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 OR5H8P0DN80 308 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 CDX1P47902 265 aaPredicted RBP7.53□□□□□ -1.2
SPG11-214ENST00000558989 RFX2P48378 723 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 RPL30P62888 115 aaKnown RBP7.53□□□□□ -1.2
SPG11-214ENST00000558989 DEFA5Q01523 94 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 SPCS2Q15005 226 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 PPP1R27Q86WC6 154 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 TCTEX1D2Q8WW35 142 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 EHFQ9NZC4 300 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 RBMX2Q9Y388 322 aaKnown RBP7.53□□□□□ -1.2
SPG11-214ENST00000558989 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
SPG11-214ENST00000558989 ARPC1BO15143 372 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms