RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TOLLIPQ9H0E2 274 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 MIXL1Q9H2W2 232 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 Q9H521 79 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 AUNIPQ9H7T9 357 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 GNB4Q9HAV0 340 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 RAB18Q9NP72 206 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 NECAP2Q9NVZ3 263 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 RHBDL2Q9NX52 303 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 COMMD3Q9UBI1 195 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 JPT1Q9UK76 154 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 PITPNC1Q9UKF7 332 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 MOB4Q9Y3A3 225 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 NUBP2Q9Y5Y2 271 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 SELENOKQ9Y6D0 94 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 SORL1Q92673 2214 aa3.27□□□□□ -1.89
SPG11-211ENST00000558561 WI2-2373I1.2A0A1W2PRP0 233 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 H7C2Y5 167 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 RAB29O14966 203 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 ATP6V0E1O15342 81 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 FGF16O43320 207 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 TNFSF12O43508 249 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 NDUFA3O95167 84 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 TNFAIP8O95379 198 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 IGHV3-11P01762 117 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 PMP2P02689 132 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 PRH1P02810 166 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 AADACP22760 399 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 ZBTB25P24278 435 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 DUTP33316 252 aaKnown RBP3.26□□□□□ -1.89
SPG11-211ENST00000558561 GNB1P62873 340 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 ARL16Q0P5N6 197 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 MMDQ15546 238 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 C5orf64Q2M2E5 130 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 C10orf55Q5SWW7 151 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 MZT2BQ6NZ67 158 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 HOGA1Q86XE5 327 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 SAMD12Q8N8I0 201 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 LFNGQ8NES3 379 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 WFDC9Q8NEX5 89 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 OR4A4PQ8NGN8 299 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 SECTM1Q8WVN6 248 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 FCGR1BQ92637 280 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 THRSPQ92748 146 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 ABHD1Q96SE0 405 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 RASL11BQ9BPW5 248 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 CABLES2Q9BTV7 478 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 OR2D2Q9H210 308 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 MMP27Q9H306 513 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 OR51J1Q9H342 316 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 RIMS4Q9H426 269 aaPredicted RBP3.26□□□□□ -1.89
SPG11-211ENST00000558561 C12orf4Q9NQ89 552 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.26□□□□□ -1.89
SPG11-211ENST00000558561 PARP11Q9NR21 331 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 ABRACLQ9P1F3 81 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 MRPS7Q9Y2R9 242 aaKnown RBP3.26□□□□□ -1.89
SPG11-211ENST00000558561 AMMECR1Q9Y4X0 333 aaPredicted RBP3.26□□□□□ -1.89
SPG11-211ENST00000558561 S4R3C0 116 aa3.26□□□□□ -1.89
SPG11-211ENST00000558561 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 METTL21EPA6NDL7 271 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 K7EIL1 84 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 ITGB1BP1O14713 200 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 NBR2O15453 112 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 XRCC3O43542 346 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 RAMP3O60896 148 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 FCGR3BO75015 233 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 CA2P00918 260 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 TRBV12-3P01733 135 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 OPN1MWP04001 364 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 OPN1MW2P0DN77 364 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 OPN1MW3P0DN78 364 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 IL3RAP26951 378 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 HLA-DMAP28067 261 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 GNRHRP30968 328 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 FCGR2CP31995 323 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 SOX6P35712 828 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 TALDO1P37837 337 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 RAB9AP51151 201 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 TAS2R20P59543 309 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 FXYD4P59646 89 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 GNG2P59768 71 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 CD81P60033 236 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 RPL23AP62750 156 aaKnown RBP3.25□□□□□ -1.89
SPG11-211ENST00000558561 ECSCRQ19T08 205 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 PDLIM3Q53GG5 364 aaPredicted RBP3.25□□□□□ -1.89
SPG11-211ENST00000558561 ZNF660Q6AZW8 331 aaPredicted RBP3.25□□□□□ -1.89
SPG11-211ENST00000558561 CNIH2Q6PI25 160 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 TRAT1Q6PIZ9 186 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 Q6ZS49 121 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 Q75L30 129 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 ZNF554Q86TJ5 538 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 NDUFA11Q86Y39 141 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 SNX29P2Q8IUI4 249 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 ZNF491Q8N8L2 437 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 MINDY2Q8NBR6 621 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 BEST4Q8NFU0 473 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 OR4D10Q8NGI6 311 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 OR10J5Q8NHC4 309 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 THAP6Q8TBB0 222 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 SLC25A46Q96AG3 418 aa3.25□□□□□ -1.89
SPG11-211ENST00000558561 PHF21AQ96BD5 680 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms