RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 HRH1P35367 487 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 OR2B8PP59922 312 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 ERVK-16P61578 105 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 RNASE12Q5GAN4 147 aaKnown RBP9.05□□□□□ -0.96
HERC1-202ENST00000558324 CTRB2Q6GPI1 263 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 GTSCR1Q86UQ5 136 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 Q8N402 240 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 BORCS5Q969J3 196 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 KCTD12Q96CX2 325 aaKnown RBP9.05□□□□□ -0.96
HERC1-202ENST00000558324 CCDC140Q96MF4 163 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 COMMD5Q9GZQ3 224 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 ZMAT4Q9H898 229 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 PLEKHA2Q9HB19 425 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 ZC4H2Q9NQZ6 224 aa9.05□□□□□ -0.96
HERC1-202ENST00000558324 TNCP24821 2201 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 SMIM31A0A1B0GVY4 71 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 IGLC7A0M8Q6 106 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 MFSD2BA6NFX1 497 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 HPGDSO60760 199 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 GGCTO75223 188 aaKnown RBP9.04□□□□□ -0.96
HERC1-202ENST00000558324 PGLYRP1O75594 196 aaPredicted RBP9.04□□□□□ -0.96
HERC1-202ENST00000558324 CRYGCP07315 174 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 NAT1P18440 290 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 ARL3P36405 182 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 POU2AF1Q16633 256 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 CD300EQ496F6 205 aaPredicted RBP9.04□□□□□ -0.96
HERC1-202ENST00000558324 PHLDA2Q53GA4 152 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 DHRS11Q6UWP2 260 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 OR10W1Q8NGF6 305 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 OR6F1Q8NGZ6 308 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 CD300LFQ8TDQ1 290 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 CACNG8Q8WXS5 425 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 EEF1AKMT3Q96AZ1 226 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 HINT2Q9BX68 163 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 SIGLEC8Q9NYZ4 499 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 COMMD9Q9P000 198 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 DMRT1Q9Y5R6 373 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 SORL1Q92673 2214 aa9.04□□□□□ -0.96
HERC1-202ENST00000558324 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 ZNF320A2RRD8 509 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 C2orf70A6NJV1 201 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 MARCH11A6NNE9 402 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 KRASP01116 189 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 APOA1P02647 267 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 FOLR2P14207 255 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 HIST1H1BP16401 226 aaKnown RBP9.03□□□□□ -0.96
HERC1-202ENST00000558324 ELK1P19419 428 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 F2RP25116 425 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 G6PCP35575 357 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 LPAR6P43657 344 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 TSPAN5P62079 268 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 GUCA2BQ16661 112 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 FAM209BQ5JX69 171 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 LYSMD2Q8IV50 215 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 CMTM1Q8IZ96 169 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 GPX8Q8TED1 209 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 FCAMRQ8WWV6 532 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 THAP7Q9BT49 309 aaPredicted RBP9.03□□□□□ -0.96
HERC1-202ENST00000558324 QTRT1Q9BXR0 403 aaKnown RBP9.03□□□□□ -0.96
HERC1-202ENST00000558324 NAA50Q9GZZ1 169 aaKnown RBP9.03□□□□□ -0.96
HERC1-202ENST00000558324 TUBA4BQ9H853 241 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 PLEKHA3Q9HB20 300 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 C19orf73Q9NVV2 129 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 NSG2Q9Y328 171 aa9.03□□□□□ -0.96
HERC1-202ENST00000558324 FAM25AB3EWG3 89 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 FAM25CB3EWG5 89 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 FAM25GB3EWG6 89 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 GPR31O00270 319 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 SMIM18P0DKX4 95 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 GPR183P32249 361 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 CD81P60033 236 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 DGCR14Q96DF8 476 aaKnown RBP9.02□□□□□ -0.97
HERC1-202ENST00000558324 TM2D3Q9BRN9 247 aa9.02□□□□□ -0.97
HERC1-202ENST00000558324 IGHV3-35A0A0C4DH35 117 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 TEX50A0A1B0GTY4 177 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 A8MZ25 164 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 M0QYG6 137 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 TPPPO94811 219 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 CLEC3BP05452 202 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 TRAPPC2P0DI81 140 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 TRAPPC2BP0DI82 140 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 OR13C7P0DN81 318 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 RCVRNP35243 200 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 RORCP51449 518 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 MECP2P51608 486 aaKnown RBP9.01□□□□□ -0.97
HERC1-202ENST00000558324 DEFB114Q30KQ6 69 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 ZNF585BQ52M93 769 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 OR2K2Q8NGT1 345 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 MUC7Q8TAX7 377 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 WDR89Q96FK6 387 aaPredicted RBP9.01□□□□□ -0.97
HERC1-202ENST00000558324 CXorf58Q96LI9 332 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 NEURL2Q9BR09 285 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 WFDC10AQ9H1F0 79 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 SCPEP1Q9HB40 452 aa9.01□□□□□ -0.97
HERC1-202ENST00000558324 TRBV7-1A0A0A6YYK4 115 aa9□□□□□ -0.97
HERC1-202ENST00000558324 IGHV3-21A0A0B4J1V1 117 aa9□□□□□ -0.97
HERC1-202ENST00000558324 TMEM213A2RRL7 107 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms