RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 C7orf50Q9BRJ6 194 aaKnown RBP12.91□□□□□ -0.34
NEK9-211ENST00000557673 FBXO7Q9Y3I1 522 aa12.91□□□□□ -0.34
NEK9-211ENST00000557673 WSB1Q9Y6I7 421 aa12.91□□□□□ -0.34
NEK9-211ENST00000557673 LINC00854A0A1B0GVQ3 168 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 G3V318 75 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 CREBL2O60519 120 aaPredicted RBP12.9□□□□□ -0.34
NEK9-211ENST00000557673 NQO2P16083 231 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 PRSS8Q16651 343 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 SSX9Q7RTT3 188 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 TP53RKQ96S44 253 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 ZNF430Q9H8G1 570 aaPredicted RBP12.9□□□□□ -0.34
NEK9-211ENST00000557673 SMAD5-AS1Q9Y6J3 95 aa12.9□□□□□ -0.34
NEK9-211ENST00000557673 C3orf85A0A1B0GTC6 90 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 CRYM-AS1A6NIL9 109 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 ARPC1BO15143 372 aaKnown RBP12.89□□□□□ -0.35
NEK9-211ENST00000557673 OR2A4O95047 310 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 LPAR6P43657 344 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 RBMS2Q15434 407 aaKnown RBP12.89□□□□□ -0.35
NEK9-211ENST00000557673 C19orf54Q5BKX5 351 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 OR4A47Q6IF82 309 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 ZNF562Q6V9R5 426 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 TMEM167AQ8TBQ9 72 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 TMEM230Q96A57 120 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 SCGB3A2Q96PL1 93 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 OR2A7Q96R45 310 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 SLC25A21Q9BQT8 299 aaPredicted RBP12.89□□□□□ -0.35
NEK9-211ENST00000557673 AIFM2Q9BRQ8 373 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 TMEM140Q9NV12 185 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 BET1LQ9NYM9 111 aa12.89□□□□□ -0.35
NEK9-211ENST00000557673 CENPXA8MT69 81 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 PLA2G10O15496 165 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 B3GALNT1O75752 331 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 LY86O95711 162 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 IGKV1-39P01597 117 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 IGKV1D-39P04432 117 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 UCP1P25874 307 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 PSMB8P28062 276 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 CCR6P51684 374 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 ERVK-16P61578 105 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 GNB1P62873 340 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 ADAD2Q8NCV1 583 aaKnown RBP12.88□□□□□ -0.35
NEK9-211ENST00000557673 GRPEL2Q8TAA5 225 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 KLK15Q9H2R5 256 aa12.88□□□□□ -0.35
NEK9-211ENST00000557673 TRAV41A0A0B4J266 112 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 LYRM1O43325 122 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 UPK1BO75841 260 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 NDUFB6O95139 128 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 SERPINE2P07093 398 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 OR5AC1P0C628 307 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 OR8U8P0C7N1 319 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 EGR2P11161 476 aaPredicted RBP12.87□□□□□ -0.35
NEK9-211ENST00000557673 RPA2P15927 270 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
NEK9-211ENST00000557673 FHL3Q13643 280 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 FXYD3Q14802 87 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 TNXAQ16473 311 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 ECSCRQ19T08 205 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 C10orf55Q5SWW7 151 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 OR4A5Q8NH83 315 aa12.87□□□□□ -0.35
NEK9-211ENST00000557673 FAM103A1Q9BTL3 118 aaKnown RBP12.87□□□□□ -0.35
NEK9-211ENST00000557673 RYR2Q92736 4967 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 TEX13DA0A0J9YY54 714 aaPredicted RBP12.86□□□□□ -0.35
NEK9-211ENST00000557673 KRASP01116 189 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 IL6RP08887 468 aaPredicted RBP12.86□□□□□ -0.35
NEK9-211ENST00000557673 FGF2P09038 288 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 G6PCP35575 357 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 TMEM65Q6PI78 240 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 TMED4Q7Z7H5 227 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 CADM3Q8N126 398 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 MYOZ3Q8TDC0 251 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 SRSF12Q8WXF0 261 aaKnown RBP12.86□□□□□ -0.35
NEK9-211ENST00000557673 SEC22AQ96IW7 307 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 TMEM222Q9H0R3 208 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 TBC1D24Q9ULP9 559 aa12.86□□□□□ -0.35
NEK9-211ENST00000557673 ACTL6BO94805 426 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 CNIH1O95406 144 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 IGLV1-40P01703 118 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 LYL1P12980 280 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
NEK9-211ENST00000557673 SUPT4H1P63272 117 aaKnown RBP12.85□□□□□ -0.35
NEK9-211ENST00000557673 ASAH1Q13510 395 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 SP6Q3SY56 376 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 SGPP2Q8IWX5 399 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 GALNT14Q96FL9 552 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 UBE2E2Q96LR5 201 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 RCHY1Q96PM5 261 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 GNB4Q9HAV0 340 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 PALMDQ9NP74 551 aa12.85□□□□□ -0.35
NEK9-211ENST00000557673 TRAV3A0A0B4J244 114 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 UPK2O00526 184 aa12.84□□□□□ -0.35
NEK9-211ENST00000557673 SOX15O60248 233 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms