RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ZNF442Q9H7R0 627 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 SPACA1Q9HBV2 294 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 NOX3Q9HBY0 568 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 ASF1BQ9NVP2 202 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 FAIMQ9NVQ4 179 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 SLC2A8Q9NY64 477 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 TREM2Q9NZC2 230 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 CLEC4AQ9UMR7 237 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 RPH3ALQ9UNE2 315 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 SLC7A11Q9UPY5 501 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 MEMO1Q9Y316 297 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 PTPN13Q12923 2485 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 MED13LQ71F56 2210 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 ABCA2Q9BZC7 2435 aa2.19□□□□□ -2.06
VRK1-207ENST00000557352 HELZ2Q9BYK8 2649 aaKnown RBP2.19□□□□□ -2.06
VRK1-207ENST00000557352 USP9YO00507 2555 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 CREBBPQ92793 2442 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 ARHGAP32A7KAX9 2087 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 COL12A1Q99715 3063 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 IGKV1D-17A0A075B6S4 117 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 IGKV1-27A0A075B6S5 117 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 IGHV1-18A0A0C4DH31 117 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 A0A1B0GUH1 482 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 ANKRD20A5PA0PJZ0 165 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 C7orf66A4D0T2 115 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 C5orf63A6NC05 138 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 G3V4G9 280 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 J3QT63 122 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 MFNGO00587 321 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 PLA2G10O15496 165 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 LYRM1O43325 122 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 ORC5O43913 435 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 CA1P00915 261 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 OCMP0CE72 109 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 GTF2F2P13984 249 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 HIST1H1DP16402 221 aaKnown RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 DTYMKP23919 212 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 COX7A1P24310 79 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 CALCRP30988 508 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 PRSS3P35030 304 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 BTCP35070 178 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 RCVRNP35243 200 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 CD200P41217 278 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 KCNJ3P48549 501 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 IDH3GP51553 393 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 EFNB2P52799 333 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 APOC4P55056 127 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 RBM11P57052 281 aaKnown RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 TAS2R19P59542 299 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 UBE2MP61081 183 aaKnown RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 FGF12P61328 243 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 PPP1CBP62140 327 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 PRDX4Q13162 271 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 PYDC2Q56P42 97 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 SPIN3Q5JUX0 258 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 VAX1Q5SQQ9 334 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 HES5Q5TA89 166 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 PLET1Q6UQ28 207 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 GLIPR1L1Q6UWM5 242 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 BIVMQ86UB2 503 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 GAPTQ8N292 157 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 TOMM5Q8N4H5 51 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 ARRDC1Q8N5I2 433 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 TMEM229BQ8NBD8 167 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 ACBD4Q8NC06 268 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 CHST4Q8NCG5 386 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 C19orf18Q8NEA5 215 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 OR8G5Q8NG78 346 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 OR56B2PQ8NGI1 322 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 OR10R2Q8NGX6 335 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 OR10Z1Q8NGY1 313 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 OR56B4Q8NH76 319 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 OR2AE1Q8NHA4 323 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 LILRB4Q8NHJ6 448 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 KLF14Q8TD94 323 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 ASB13Q8WXK3 278 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 OR5P3Q8WZ94 311 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 RNASE6Q93091 150 aaKnown RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 S100PBPQ96BU1 408 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 SEH1LQ96EE3 360 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 BORCS8Q96FH0 119 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 PGLYRP4Q96LB8 373 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 S100A13Q99584 98 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 DHRS9Q9BPW9 319 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 MICU1Q9BPX6 476 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 SLC25A21Q9BQT8 299 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 RNF126Q9BV68 326 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 RTL8AQ9BWD3 113 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 CHST6Q9GZX3 395 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 ALX4Q9H161 411 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 METTL9Q9H1A3 318 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 NCOR1P1Q9H4R4 102 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 AUNIPQ9H7T9 357 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 HES4Q9HCC6 221 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 MYOZ1Q9NP98 299 aaPredicted RBP2.18□□□□□ -2.06
VRK1-207ENST00000557352 RASL12Q9NYN1 266 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 SH3BGRL2Q9UJC5 107 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 POLDIP2Q9Y2S7 368 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 STARD10Q9Y365 291 aa2.18□□□□□ -2.06
VRK1-207ENST00000557352 NUBP2Q9Y5Y2 271 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms