RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 IL17DQ8TAD2 202 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 EEF1AKMT3Q96AZ1 226 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 CCDC140Q96MF4 163 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 DIABLOQ9NR28 239 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 S4R3C0 116 aa11.97□□□□□ -0.49
TUBB3-213ENST00000557262 ZNF320A2RRD8 509 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 RBFOX2O43251 390 aaKnown RBP eCLIP11.96□□□□□ -0.49
TUBB3-213ENST00000557262 PPYP01298 95 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 MYOD1P15172 320 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 TIMM50Q3ZCQ8 353 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 OR4A47Q6IF82 309 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 SLC25A38Q96DW6 304 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 WDR89Q96FK6 387 aaPredicted RBP11.96□□□□□ -0.49
TUBB3-213ENST00000557262 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 RNF167Q9H6Y7 350 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 SRD5A3Q9H8P0 318 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 RETNQ9HD89 108 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 HRASLSQ9HDD0 168 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 DNAH1Q9P2D7 4330 aa11.96□□□□□ -0.49
TUBB3-213ENST00000557262 TRBV7-1A0A0A6YYK4 115 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 ATP6V1G2O95670 118 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 HPRT1P00492 218 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 CLEC3BP05452 202 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 TAS2R31P59538 309 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 CATR1Q13166 79 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 ZNF57Q68EA5 555 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-213ENST00000557262 ZNF773Q6PK81 442 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 UXS1Q8NBZ7 420 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 GIMAP1Q8WWP7 306 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 CXorf58Q96LI9 332 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 AUNIPQ9H7T9 357 aa11.95□□□□□ -0.5
TUBB3-213ENST00000557262 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 LOC100506127A0A0U1RQW1 187 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 SULT1C2O00338 296 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 UPK2O00526 184 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 REG1AP05451 166 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 NQO2P16083 231 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 CBX5P45973 191 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 OR2B8PP59922 312 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 POU2AF1Q16633 256 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 SLC16A13Q7RTY0 426 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 CACNG8Q8WXS5 425 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 FAM110AQ9BQ89 295 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 COMMD5Q9GZQ3 224 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 WFDC10AQ9H1F0 79 aa11.94□□□□□ -0.5
TUBB3-213ENST00000557262 TRAV3A0A0B4J244 114 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 TMEM213A2RRL7 107 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 A8MWP6 167 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 TMEM127O75204 238 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 FCER2P06734 321 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 FXYD4P59646 89 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 TMEM61Q8N0U2 210 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 CD300LFQ8TDQ1 290 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 SRSF8Q9BRL6 282 aaKnown RBP11.93□□□□□ -0.5
TUBB3-213ENST00000557262 THYN1Q9P016 225 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 MLXQ9UH92 298 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 SELENOKQ9Y6D0 94 aa11.93□□□□□ -0.5
TUBB3-213ENST00000557262 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 FGF2P09038 288 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 ANKRD55Q3KP44 614 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 TM4SF20Q53R12 229 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 OR52B4Q8NGK2 314 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 BORCS5Q969J3 196 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
TUBB3-213ENST00000557262 EPPK1P58107 5090 aaKnown RBP11.92□□□□□ -0.5
TUBB3-213ENST00000557262 TRAV25A0A0B4J276 109 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 IGLC7A0M8Q6 106 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 PTBP1P26599 531 aaKnown RBP eCLIP11.91□□□□□ -0.52e-42■■■■■ 46.6
TUBB3-213ENST00000557262 GNRHRP30968 328 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 AADACL3Q5VUY0 350 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 PLET1Q6UQ28 207 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 DHRS11Q6UWP2 260 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 DMBX1Q8NFW5 382 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 OR51H1Q8NH63 302 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 ZNF502Q8TBZ5 544 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 MARC2Q969Z3 335 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 S100A16Q96FQ6 103 aaKnown RBP11.91□□□□□ -0.5
TUBB3-213ENST00000557262 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
TUBB3-213ENST00000557262 MRPL27Q9P0M9 148 aaKnown RBP11.91□□□□□ -0.5
TUBB3-213ENST00000557262 CYB5BO43169 146 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 XRCC3O43542 346 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 SCAF4O95104 1147 aaKnown RBP11.9□□□□□ -0.5
TUBB3-213ENST00000557262 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
TUBB3-213ENST00000557262 HERV-K104P61576 105 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 NEDD8Q15843 81 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 ZNF585BQ52M93 769 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 THOC7Q6I9Y2 204 aaKnown RBP11.9□□□□□ -0.5
TUBB3-213ENST00000557262 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 TMEM17Q86X19 198 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 CROCCP3Q8IVE0 287 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 VN1R17PQ8TDU5 208 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 QTRT1Q9BXR0 403 aaKnown RBP11.9□□□□□ -0.5
TUBB3-213ENST00000557262 COMMD9Q9P000 198 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 HYDINQ4G0P3 5121 aa11.9□□□□□ -0.5
TUBB3-213ENST00000557262 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms