RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 A0A0J9YWU9 116 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 CLEC3BP05452 202 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 C8orf88P0DMB2 117 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 GALP22466 123 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 GPR183P32249 361 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 EWSR1Q01844 656 aaKnown RBP eCLIP13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 OR1L6Q8NGR2 347 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 OR4A5Q8NH83 315 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 BET1LQ9NYM9 111 aa13.63□□□□□ -0.23
VIPAS39-209ENST00000556909 NUPR2A6NF83 97 aa13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 TNFSF12O43508 249 aa13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 OR2B8PP59922 312 aa13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 ZNF585BQ52M93 769 aa13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 RBPMS2Q6ZRY4 209 aaKnown RBP13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 WFDC3Q8IUB2 231 aa13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 ZNF502Q8TBZ5 544 aa13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 MRPL27Q9P0M9 148 aaKnown RBP13.62□□□□□ -0.23
VIPAS39-209ENST00000556909 IGHV3-35A0A0C4DH35 117 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 IGLC7A0M8Q6 106 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 NOTOA8MTQ0 251 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 SCGNO76038 276 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 SPAG16Q8N0X2 631 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 LGALS14Q8TCE9 139 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 SECTM1Q8WVN6 248 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 HRASLSQ9HDD0 168 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 CCL28Q9NRJ3 127 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 BLOC1S6Q9UL45 172 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 TP53TG1Q9Y2A0 90 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 UFC1Q9Y3C8 167 aa13.61□□□□□ -0.23
VIPAS39-209ENST00000556909 DNAH10Q8IVF4 4471 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 APOC4P55056 127 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 ELLP55199 621 aaPredicted RBP13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 TNFRSF9Q07011 255 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 MSMO1Q15800 293 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 DEFB135Q30KP9 77 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 Q6ZWC4 215 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 LYG2Q86SG7 212 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 OR2C3Q8N628 320 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 OR13F1Q8NGS4 319 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 SPAG8Q99932 426 aaPredicted RBP13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 ZNF436Q9C0F3 470 aaPredicted RBP13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 C5orf66Q9H5L9 145 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 DAPK2Q9UIK4 370 aa13.6□□□□□ -0.23
VIPAS39-209ENST00000556909 TRAV3A0A0B4J244 114 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 RBFOX2O43251 390 aaKnown RBP eCLIP13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 PTHLHP12272 177 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 FCGR2CP31995 323 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 BMI1P35226 326 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 TAS2R31P59538 309 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 ARPC4P59998 168 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 PLET1Q6UQ28 207 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 TMEM190Q8WZ59 177 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 CNBD2Q96M20 576 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 AIFM2Q9BRQ8 373 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 TXNL4BQ9NX01 149 aaKnown RBP13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 UBQLN2Q9UHD9 624 aa13.59□□□□□ -0.23
VIPAS39-209ENST00000556909 SULT1C2O00338 296 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 UPK2O00526 184 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 TGOLN2O43493 480 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 SPRY2O43597 315 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 PTBP1P26599 531 aaKnown RBP eCLIP13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 FGF9P31371 208 aaPredicted RBP13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 POU2AF1Q16633 256 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 SFXN4Q6P4A7 337 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 SLC38A6Q8IZM9 456 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 BEST4Q8NFU0 473 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 SRSF8Q9BRL6 282 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 RHBDL2Q9NX52 303 aa13.58□□□□□ -0.24
VIPAS39-209ENST00000556909 TSPAN4O14817 238 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 PPYP01298 95 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 CATR1Q13166 79 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 ODF3L2Q3SX64 289 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 ZNF773Q6PK81 442 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 GVQW1Q8N7I0 195 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 ZBTB34Q8NCN2 500 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 OR10W1Q8NGF6 305 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 QTRT1Q9BXR0 403 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 COMMD5Q9GZQ3 224 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 TMEM140Q9NV12 185 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 THYN1Q9P016 225 aa13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 RRP15Q9Y3B9 282 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-209ENST00000556909 UBE2CO00762 179 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 HPRT1P00492 218 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 NQO2P16083 231 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 ATF4P18848 351 aaPredicted RBP13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 IZUMO2Q6UXV1 221 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 TPRA1Q86W33 373 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 GDPD1Q8N9F7 314 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 VN1R17PQ8TDU5 208 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 SLC5A7Q9GZV3 580 aa13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 DAZ1Q9NQZ3 744 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-209ENST00000556909 KIR2DL5BA0A0G2JN68 375 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 KIR2DL5BA0A0G2JPC4 375 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 OR2T8A6NH00 312 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 S1PR2O95136 353 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 FGF2P09038 288 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 FXYD4P59646 89 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 GABARAPL2P60520 117 aa13.55□□□□□ -0.24
VIPAS39-209ENST00000556909 UBE2UQ5VVX9 321 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms