RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
PCNX4-213ENST00000556907 WDR89Q96FK6 387 aaPredicted RBP13.04□□□□□ -0.32
PCNX4-213ENST00000556907 RASL11BQ9BPW5 248 aa13.04□□□□□ -0.32
PCNX4-213ENST00000556907 BET1LQ9NYM9 111 aa13.04□□□□□ -0.32
PCNX4-213ENST00000556907 PLXNB1O43157 2135 aa13.04□□□□□ -0.32
PCNX4-213ENST00000556907 NBR2O15453 112 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 NDUFA3O95167 84 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 IGLV2-23P01705 113 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 C1QBP02746 253 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 IL6RP08887 468 aaPredicted RBP13.03□□□□□ -0.32
PCNX4-213ENST00000556907 BLCAPP62952 87 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 AARDQ4LEZ3 155 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 AWAT1Q58HT5 328 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 OR4A47Q6IF82 309 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 FAM71E2Q8N5Q1 922 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 Q8N9W7 124 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 VSTM2AQ8TAG5 236 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 PPP1R1CQ8WVI7 109 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 MDFIQ99750 246 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 ZNF702PQ9H963 129 aa13.03□□□□□ -0.32
PCNX4-213ENST00000556907 FAM90A26D6RGX4 464 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 KBTBD11O94819 623 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 AMY1AP04745 511 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 FGF2P09038 288 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 OR9G9P0C7N8 305 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 F2RL1P55085 397 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 UBE2KP61086 200 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 RPS16P62249 146 aaKnown RBP13.02□□□□□ -0.33
PCNX4-213ENST00000556907 FGL1Q08830 312 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 IZUMO4Q1ZYL8 232 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 VMA21Q3ZAQ7 101 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 FBLN7Q53RD9 439 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 C12orf54Q6X4T0 127 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 Q6ZRM9 215 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 SSX9Q7RTT3 188 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 OR4A5Q8NH83 315 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 OR1S1Q8NH92 325 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 SPATA3Q8NHX4 192 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 ZFP57Q9NU63 452 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 RNF114Q9Y508 228 aa13.02□□□□□ -0.33
PCNX4-213ENST00000556907 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 SRRM4A7MD48 611 aaKnown RBP13.01□□□□□ -0.33
PCNX4-213ENST00000556907 RRHO14718 337 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 KCNAB3O43448 404 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 MPC2O95563 127 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 PET100P0DJ07 73 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 MDKP21741 143 aaPredicted RBP13.01□□□□□ -0.33
PCNX4-213ENST00000556907 C5orf64Q2M2E5 130 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 ZFP69Q49AA0 526 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 ARSJQ5FYB0 599 aaPredicted RBP13.01□□□□□ -0.33
PCNX4-213ENST00000556907 VKORC1L1Q8N0U8 176 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 TMEM167AQ8TBQ9 72 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 GSKIPQ9P0R6 139 aa13.01□□□□□ -0.33
PCNX4-213ENST00000556907 SMLR1H3BR10 107 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 BOLA2-SMG1P6H3BVE0 249 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 UPK2O00526 184 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 IGHG2P01859 326 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 MBPP02686 304 aaPredicted RBP13□□□□□ -0.33
PCNX4-213ENST00000556907 PSMB6P28072 239 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 NKX2-1P43699 371 aaPredicted RBP13□□□□□ -0.33
PCNX4-213ENST00000556907 RAB32Q13637 225 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 ZNF429Q86V71 674 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 TEX45Q8NA69 505 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 RBMXL1Q96E39 390 aaKnown RBP13□□□□□ -0.33
PCNX4-213ENST00000556907 CTNNBIP1Q9NSA3 81 aaPredicted RBP13□□□□□ -0.33
PCNX4-213ENST00000556907 CACFD1Q9UGQ2 172 aa13□□□□□ -0.33
PCNX4-213ENST00000556907 FOXA2Q9Y261 457 aaPredicted RBP13□□□□□ -0.33
PCNX4-213ENST00000556907 RCL1Q9Y2P8 373 aaKnown RBP13□□□□□ -0.33
PCNX4-213ENST00000556907 K7EPK0 472 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 SLC25A17O43808 307 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 SCGB1D2O95969 90 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 HLA-DRB1P01911 266 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 CRYGBP07316 175 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 LYL1P12980 280 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 VDAC2P45880 294 aaPredicted RBP12.99□□□□□ -0.33
PCNX4-213ENST00000556907 PROK1P58294 105 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 OR2B8PP59922 312 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 S100A10P60903 97 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 ID3Q02535 119 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 PSG5Q15238 335 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 LRRC37A5PQ49AS3 106 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 PDLIM3Q53GG5 364 aaPredicted RBP12.99□□□□□ -0.33
PCNX4-213ENST00000556907 OR4A16Q8NH70 328 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 RITA1Q96K30 269 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 TMEM14BQ9NUH8 114 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 HSPB7Q9UBY9 170 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 ZNF580Q9UK33 172 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 PRNDQ9UKY0 176 aa12.99□□□□□ -0.33
PCNX4-213ENST00000556907 TRAV3A0A0B4J244 114 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 ST8SIA3O43173 380 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 SNAPC5O75971 98 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 HNRNPCP07910 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCNX4-213ENST00000556907 SLC25A4P12235 298 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 CNTFRP26992 372 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 TNFRSF9Q07011 255 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 PLGLAQ15195 96 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 Q5BKY6 102 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 C9orf152Q5JTZ5 239 aa12.98□□□□□ -0.33
PCNX4-213ENST00000556907 C11orf87Q6NUJ2 197 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms