RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SDHCQ99643 169 aaPredicted RBP7.5□□□□□ -1.21
SRP54-210ENST00000556380 AIFM2Q9BRQ8 373 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 RTBDNQ9BSG5 229 aaPredicted RBP7.5□□□□□ -1.21
SRP54-210ENST00000556380 SRRQ9GZT4 340 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 COMMD9Q9P000 198 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 CGB1A6NKQ9 187 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 DISC1C4P0D8 188 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 TEX22C9J3V5 150 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 I3L521 148 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 UPK2O00526 184 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 CREBL2O60519 120 aaPredicted RBP7.49□□□□□ -1.21
SRP54-210ENST00000556380 CTSDP07339 412 aaPredicted RBP7.49□□□□□ -1.21
SRP54-210ENST00000556380 FGF2P09038 288 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 PF4V1P10720 104 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 MYOD1P15172 320 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 PGAM2P15259 253 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 S100GP29377 79 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 MAS1LP35410 378 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 RUNX1Q01196 453 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 SURF2Q15527 256 aaPredicted RBP7.49□□□□□ -1.21
SRP54-210ENST00000556380 SCGB2B2Q4G0G5 96 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 KHDC1LQ5JSQ8 128 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 SSX9Q7RTT3 188 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 POC5Q8NA72 575 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 KLHL30-AS1Q8NEE0 82 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 OR5T1Q8NG75 326 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 OR51S1Q8NGJ8 323 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 OR4A5Q8NH83 315 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 ZFAND1Q8TCF1 268 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 MARCH1Q8TCQ1 289 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 CASTOR1Q8WTX7 329 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 RAX2Q96IS3 184 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 C5orf66Q9H5L9 145 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 GNB4Q9HAV0 340 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 GPR132Q9UNW8 380 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 VSIG4Q9Y279 399 aa7.49□□□□□ -1.21
SRP54-210ENST00000556380 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
SRP54-210ENST00000556380 H3BUA1 57 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 RBMXL2O75526 392 aaKnown RBP7.48□□□□□ -1.21
SRP54-210ENST00000556380 KRASP01116 189 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 P0C879 139 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 HLA-GP17693 338 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 MYCNOSP40205 109 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 PPP5CP53041 499 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 PIGPP57054 158 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 AP3S2P59780 193 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 OR2B8PP59922 312 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 RPL8P62917 257 aaKnown RBP7.48□□□□□ -1.21
SRP54-210ENST00000556380 TNXAQ16473 311 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 BAK1Q16611 211 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 KLK9Q2XQG4 91 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 TMEM65Q6PI78 240 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 MRPL41Q8IXM3 137 aaKnown RBP7.48□□□□□ -1.21
SRP54-210ENST00000556380 TTC9CQ8N5M4 171 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 LINC00482Q8N8I6 264 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 GDPD1Q8N9F7 314 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 ADAD2Q8NCV1 583 aaKnown RBP7.48□□□□□ -1.21
SRP54-210ENST00000556380 C4orf3Q8WVX3 66 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 SEC22AQ96IW7 307 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 TP53RKQ96S44 253 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 PRRT1Q99946 306 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 HRASLSQ9HDD0 168 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 TMEM140Q9NV12 185 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 KLK9Q9UKQ9 250 aa7.48□□□□□ -1.21
SRP54-210ENST00000556380 HMX3A6NHT5 357 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 MARCH11A6NNE9 402 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 H0Y980 276 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 CCL24O00175 119 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 B3GALNT1O75752 331 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 ACTL6BO94805 426 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 APELAP0DMC3 54 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 RPA2P15927 270 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 FAUP35544 74 aaKnown RBP7.47□□□□□ -1.21
SRP54-210ENST00000556380 G6PCP35575 357 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 RPL27AP46776 148 aaKnown RBP7.47□□□□□ -1.21
SRP54-210ENST00000556380 FHL3Q13643 280 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 DEFB136Q30KP8 78 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 CNPY1Q3B7I2 92 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 MS4A10Q96PG2 267 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 SPIN2AQ99865 258 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 SPIN2BQ9BPZ2 258 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 SLA2Q9H6Q3 261 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 SCP2D1Q9UJQ7 156 aa7.47□□□□□ -1.21
SRP54-210ENST00000556380 TRBV9A0A0B4J1U6 114 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 C3orf85A0A1B0GTC6 90 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 TEX50A0A1B0GTY4 177 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 NPIPB5A8MRT5 1133 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 NUDT19A8MXV4 375 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 IGKV1-5P01602 117 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 CRYGCP07315 174 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 OR9G9P0C7N8 305 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 UCP1P25874 307 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 ZNF45Q02386 682 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 SP6Q3SY56 376 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 TOMM5Q8N4H5 51 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 CCDC71LQ8N9Z2 235 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 DMBX1Q8NFW5 382 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 GLYATL2Q8WU03 294 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 TMEM230Q96A57 120 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms