RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 KIR2DL5BA0A0G2JPC4 375 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 PTGES3LE9PB15 166 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 J3QRK9 145 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 KBTBD11O94819 623 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 DHFRP00374 187 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 CLEC3BP05452 202 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 ZNF735P0CB33 412 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 HIST1H1BP16401 226 aaKnown RBP7.93□□□□□ -1.14
SYNE2-221ENST00000556342 HIST1H1DP16402 221 aaKnown RBP7.93□□□□□ -1.14
SYNE2-221ENST00000556342 CD36P16671 472 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 CTRB1P17538 263 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 GADD45AP24522 165 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 PSMB6P28072 239 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 MAS1LP35410 378 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 RANBP1P43487 201 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 RPS25P62851 125 aaKnown RBP7.93□□□□□ -1.14
SYNE2-221ENST00000556342 ZNF585BQ52M93 769 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 CTRB2Q6GPI1 263 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 Q6ZS49 121 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 SLC38A6Q8IZM9 456 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 PUSL1Q8N0Z8 303 aaKnown RBP7.93□□□□□ -1.14
SYNE2-221ENST00000556342 KIR2DL5AQ8N109 375 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 OR2C3Q8N628 320 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 STPG3Q8N7X2 389 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 OR10R2Q8NGX6 335 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 OR4S2Q8NH73 311 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 KIR2DL5BQ8NHK3 375 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 VSTM2AQ8TAG5 236 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 TMEM167AQ8TBQ9 72 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 RNF183Q96D59 192 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 SPAG8Q99932 426 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-221ENST00000556342 CENPOQ9BU64 300 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 MRPL27Q9P0M9 148 aaKnown RBP7.93□□□□□ -1.14
SYNE2-221ENST00000556342 UBQLN2Q9UHD9 624 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 RBMX2Q9Y388 322 aaKnown RBP7.93□□□□□ -1.14
SYNE2-221ENST00000556342 V9GY05 133 aa7.93□□□□□ -1.14
SYNE2-221ENST00000556342 VPS13DQ5THJ4 4388 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 IGLV11-55A0A075B6I3 123 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 A0A075B6Q4 140 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 TRBV7-1A0A0A6YYK4 115 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 MFSD2BA6NFX1 497 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 ERICH4A6NGS2 130 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 RAB27BO00194 218 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 GALP22466 123 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 PSMA1P25786 263 aaKnown RBP7.92□□□□□ -1.14
SYNE2-221ENST00000556342 CALRP27797 417 aaKnown RBP7.92□□□□□ -1.14
SYNE2-221ENST00000556342 GPR183P32249 361 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 ELLP55199 621 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-221ENST00000556342 IRF3Q14653 427 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 HES5Q5TA89 166 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 CXorf58Q96LI9 332 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 UFC1Q9Y3C8 167 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 OR2W1Q9Y3N9 320 aa7.92□□□□□ -1.14
SYNE2-221ENST00000556342 IGHV3-35A0A0C4DH35 117 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 TSPAN4O14817 238 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 SLC22A5O76082 557 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 IGLV2-14P01704 120 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 HLA-DQB1P01920 261 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 REG1AP05451 166 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 HSMCR30P0CW71 290 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 DEFA4P12838 97 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 NFYAP23511 347 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-221ENST00000556342 CRHBPP24387 322 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 TALDO1P37837 337 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 PSMD7P51665 324 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 RPL8P62917 257 aaKnown RBP7.91□□□□□ -1.14
SYNE2-221ENST00000556342 FABP5Q01469 135 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 TRAM1Q15629 374 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 ODF3L2Q3SX64 289 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 ZNF502Q8TBZ5 544 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 TCTEX1D2Q8WW35 142 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 HSD17B10Q99714 261 aaKnown RBP7.91□□□□□ -1.14
SYNE2-221ENST00000556342 C5orf66Q9H5L9 145 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
SYNE2-221ENST00000556342 IGKV1D-13A0A0B4J2D9 117 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 CGB1A6NKQ9 187 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 S1PR2O95136 353 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 CTXN2P0C2S0 81 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 IGKV1-13P0DP09 117 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 MYOD1P15172 320 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 RPL35AP18077 110 aaKnown RBP7.9□□□□□ -1.14
SYNE2-221ENST00000556342 DTYMKP23919 212 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 BRWD1-AS2P59051 145 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 EIF4EBP1Q13541 118 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-221ENST00000556342 SSX1Q16384 188 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 PLET1Q6UQ28 207 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 SSX9Q7RTT3 188 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 GATAD1Q8WUU5 269 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 TMEM190Q8WZ59 177 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 ZNF436Q9C0F3 470 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-221ENST00000556342 MAP6D1Q9H9H5 199 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 ELF5Q9UKW6 265 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-221ENST00000556342 SPATA2Q9UM82 520 aa7.9□□□□□ -1.14
SYNE2-221ENST00000556342 HRASP01112 189 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 HLA-GP17693 338 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 FCGR2BP31994 310 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-221ENST00000556342 OR10A3P58181 314 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 OR2B8PP59922 312 aa7.89□□□□□ -1.15
SYNE2-221ENST00000556342 MLLT11Q13015 90 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-221ENST00000556342 ARL6IP1Q15041 203 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms