RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 KIAA1109Q2LD37 5005 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 A0A1B0GW64 132 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 MFSD2BA6NFX1 497 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 IGLV2-14P01704 120 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 REG1AP05451 166 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 HLA-GP17693 338 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 MYL9P24844 172 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 GPR183P32249 361 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 CDNFQ49AH0 187 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 HACD4Q5VWC8 232 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 CNIH2Q6PI25 160 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 PLET1Q6UQ28 207 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 UNQ9165/PRO28630Q6UXU0 137 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 SSX9Q7RTT3 188 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 MFSD4AQ8N468 514 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 OR4A5Q8NH83 315 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 TAS2R8Q9NYW2 309 aa11.48□□□□□ -0.57
SUPT16H-205ENST00000556217 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 CYB5BO43169 146 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 RAB3BP20337 219 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 LAMTOR1Q6IAA8 161 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 RNF183Q96D59 192 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 HRASLSQ9HDD0 168 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 BET1LQ9NYM9 111 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 UBQLN2Q9UHD9 624 aa11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 ELF5Q9UKW6 265 aaPredicted RBP11.47□□□□□ -0.57
SUPT16H-205ENST00000556217 TSPAN4O14817 238 aa11.46□□□□□ -0.57
SUPT16H-205ENST00000556217 EIF4EBP1Q13541 118 aaPredicted RBP11.46□□□□□ -0.57
SUPT16H-205ENST00000556217 PRSS48Q7RTY5 328 aa11.46□□□□□ -0.57
SUPT16H-205ENST00000556217 ZNF502Q8TBZ5 544 aa11.46□□□□□ -0.57
SUPT16H-205ENST00000556217 ZNF436Q9C0F3 470 aaPredicted RBP11.46□□□□□ -0.57
SUPT16H-205ENST00000556217 IGHV3-35A0A0C4DH35 117 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 SCGNO76038 276 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 PTBP1P26599 531 aaKnown RBP eCLIP11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 BRWD1-AS2P59051 145 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 OR2B8PP59922 312 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 TIMM50Q3ZCQ8 353 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 LGALS9CQ6DKI2 356 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 PHLDA1Q8WV24 401 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 COMMD5Q9GZQ3 224 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 C6orf62Q9GZU0 229 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 DAZ1Q9NQZ3 744 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 ANXA10Q9UJ72 324 aa11.45□□□□□ -0.58
SUPT16H-205ENST00000556217 TGOLN2O43493 480 aa11.44□□□□□ -0.58
SUPT16H-205ENST00000556217 GNG2P59768 71 aa11.44□□□□□ -0.58
SUPT16H-205ENST00000556217 MSMO1Q15800 293 aa11.44□□□□□ -0.58
SUPT16H-205ENST00000556217 VN1R17PQ8TDU5 208 aa11.44□□□□□ -0.58
SUPT16H-205ENST00000556217 NUDCD2Q8WVJ2 157 aa11.44□□□□□ -0.58
SUPT16H-205ENST00000556217 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
SUPT16H-205ENST00000556217 GALNT14Q96FL9 552 aa11.44□□□□□ -0.58
SUPT16H-205ENST00000556217 IGLC7A0M8Q6 106 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 CGB1A6NKQ9 187 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 TNFSF12O43508 249 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 DEDDO75618 318 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 TAS2R31P59538 309 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 ODF3L2Q3SX64 289 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 THOC7Q6I9Y2 204 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 ZNF367Q7RTV3 350 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 SPAG16Q8N0X2 631 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 ZBTB34Q8NCN2 500 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 NDUFB11Q9NX14 153 aa11.43□□□□□ -0.58
SUPT16H-205ENST00000556217 TRDV1A0A1B0GX56 115 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 TMEM235A6NFC5 223 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 FGF2P09038 288 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 NQO2P16083 231 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 ARPC4P59998 168 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 CATR1Q13166 79 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 SPSB3Q6PJ21 355 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 HSD17B13Q7Z5P4 300 aaPredicted RBP11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 SECTM1Q8WVN6 248 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 GPHA2Q96T91 129 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 QTRT1Q9BXR0 403 aaKnown RBP11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 MFFQ9GZY8 342 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 MAP6D1Q9H9H5 199 aa11.42□□□□□ -0.58
SUPT16H-205ENST00000556217 OR2T8A6NH00 312 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 NDUFA4O00483 81 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 UPK2O00526 184 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 HPRT1P00492 218 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 RPA2P15927 270 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 CMC4P56277 68 aaPredicted RBP11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 GDPD1Q8N9F7 314 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 OR13F1Q8NGS4 319 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 C20orf24Q9BUV8 137 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 CCL28Q9NRJ3 127 aa11.41□□□□□ -0.58
SUPT16H-205ENST00000556217 K7EMT4 169 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms