RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TMEM160Q9NX00 188 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 C1QTNF9BB2RNN3 333 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 SNAI2O43623 268 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 NPIPB7O75200 414 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 HBBP68871 147 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 NUP37Q8NFH4 326 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 SPOCK3Q9BQ16 436 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 GP6Q9HCN6 339 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
VTI1B-204ENST00000554659 CCL21O00585 134 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 RAMP1O60894 148 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 ATRAIDQ6UW56 229 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 WDYHV1Q96HA8 205 aa11.85□□□□□ -0.51
VTI1B-204ENST00000554659 GEMIN7Q9H840 131 aaKnown RBP11.85□□□□□ -0.51
VTI1B-204ENST00000554659 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 ZNF414Q96IQ9 312 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 IL36BQ9NZH7 164 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 FAM74A4Q5TZK3 123 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 OR13C6PQ8NH95 151 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 CLDND2Q8NHS1 167 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 GSN-AS1Q9NRJ2 163 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 MRPS16Q9Y3D3 137 aaKnown RBP11.84□□□□□ -0.51
VTI1B-204ENST00000554659 IGKV3OR2-268A0A0C4DH90 116 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 TBX6O95947 436 aaPredicted RBP11.84□□□□□ -0.51
VTI1B-204ENST00000554659 LIPFP07098 398 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 HIST1H1AQ02539 215 aaPredicted RBP11.84□□□□□ -0.51
VTI1B-204ENST00000554659 NIT1Q86X76 327 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 POLR2AP24928 1970 aaKnown RBP11.84□□□□□ -0.51
VTI1B-204ENST00000554659 J3QRE1 110 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 LEAP2Q969E1 77 aa11.84□□□□□ -0.51
VTI1B-204ENST00000554659 TRBV20OR9-2A0A075B6H5 130 aa11.83□□□□□ -0.51
VTI1B-204ENST00000554659 RAB9AP51151 201 aa11.83□□□□□ -0.51
VTI1B-204ENST00000554659 GOLT1AQ6ZVE7 132 aa11.83□□□□□ -0.51
VTI1B-204ENST00000554659 PRR7Q8TB68 274 aa11.83□□□□□ -0.51
VTI1B-204ENST00000554659 NPIPB3Q92617 1050 aa11.83□□□□□ -0.51
VTI1B-204ENST00000554659 TRAV9-1A0A075B6T8 112 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 Q5PR19 223 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 UNQ5815/PRO19632Q6UWF5 114 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 TMEM171Q8WVE6 324 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 NKX2-8O15522 239 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 HOXA5P20719 270 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 GPX4P36969 197 aaPredicted RBP11.83□□□□□ -0.52
VTI1B-204ENST00000554659 TTC9CQ8N5M4 171 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 ST6GALNAC6Q969X2 333 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 C12orf77C9JDV5 145 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 RRHO14718 337 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 TIAF1O95411 115 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 MPZP25189 248 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 C1QTNF5Q9BXJ0 243 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 SDF2L1Q9HCN8 221 aa11.83□□□□□ -0.52
VTI1B-204ENST00000554659 MEF2CQ06413 473 aaPredicted RBP11.82□□□□□ -0.52
VTI1B-204ENST00000554659 LY6G6FQ5SQ64 297 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 RNF126Q9BV68 326 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 F8VVB4 439 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 F8VWA3 439 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 DNM1P46Q6ZS02 220 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.82□□□□□ -0.52
VTI1B-204ENST00000554659 NUDT11Q96G61 164 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
VTI1B-204ENST00000554659 IGHV3-48P01763 117 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 Q6ZT83 130 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 PPP1R32Q7Z5V6 425 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 GPX1P07203 203 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 ACP7Q6ZNF0 438 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 MRAP2Q96G30 205 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 WNT9BO14905 357 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 REG1AP05451 166 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 RELQ04864 619 aaPredicted RBP11.82□□□□□ -0.52
VTI1B-204ENST00000554659 ZNF56Q15929 161 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 DMRTA2Q96SC8 542 aa11.82□□□□□ -0.52
VTI1B-204ENST00000554659 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
VTI1B-204ENST00000554659 ZCCHC14Q8WYQ9 949 aaKnown RBP11.81□□□□□ -0.52
VTI1B-204ENST00000554659 C18orf12Q96KH6 178 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 PPIAL4CA0A0B4J2A2 164 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 LYPD3O95274 346 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 PPIAL4GP0DN37 164 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 UCNP55089 124 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 SLC25A28Q96A46 364 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 ANKRD36A6QL64 1941 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 SUMO2P61956 95 aaKnown RBP11.81□□□□□ -0.52
VTI1B-204ENST00000554659 LINC00305Q7Z4B0 112 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 ZNF525Q8N782 197 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 FADS6Q8N9I5 356 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 OSR1Q8TAX0 266 aaPredicted RBP11.81□□□□□ -0.52
VTI1B-204ENST00000554659 TIMP4Q99727 224 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 IFI27L2Q9H2X8 130 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 FGF16O43320 207 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 TFF3Q07654 80 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 RPL39P5Q59GN2 51 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 CLEC7AQ9BXN2 247 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 ZNF703Q9H7S9 590 aaPredicted RBP11.81□□□□□ -0.52
VTI1B-204ENST00000554659 JKAMPQ9P055 326 aa11.81□□□□□ -0.52
VTI1B-204ENST00000554659 FTH1P19P0C7X4 201 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms