RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SPIN2AQ99865 258 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 SPIN2BQ9BPZ2 258 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 HSPB9Q9BQS6 159 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 PDCD10Q9BUL8 212 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 PARP12Q9H0J9 701 aaKnown RBP8.27□□□□□ -1.09
SHMT2-215ENST00000554656 OR2D2Q9H210 308 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 COMMD9Q9P000 198 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 C5orf51A6NDU8 294 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 G3V3Q6 166 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 AP4M1O00189 453 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 SIX6O95475 246 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 SLC25A4P12235 298 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 F2RL1P55085 397 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 SLC35B1P78383 322 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 EIF4EBP1Q13541 118 aaPredicted RBP8.26□□□□□ -1.09
SHMT2-215ENST00000554656 FOXRED2Q8IWF2 684 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 FAM71E2Q8N5Q1 922 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 RBPMSQ93062 196 aaKnown RBP8.26□□□□□ -1.09
SHMT2-215ENST00000554656 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 TP53RKQ96S44 253 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 ABHD14AQ9BUJ0 271 aa8.26□□□□□ -1.09
SHMT2-215ENST00000554656 MCRIP2Q9BUT9 160 aaKnown RBP8.26□□□□□ -1.09
SHMT2-215ENST00000554656 NCBP2LA6PVI3 153 aaKnown RBP8.25□□□□□ -1.09
SHMT2-215ENST00000554656 CCSO14618 274 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 RBFOX2O43251 390 aaKnown RBP eCLIP8.25□□□□□ -1.095e-15■■■■■ 33.3
SHMT2-215ENST00000554656 ADAP1O75689 374 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 ATG12O94817 140 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 HOXB5P09067 269 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 PET100P0DJ07 73 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 SLC25A6P12236 298 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 C4BPBP20851 252 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 VDAC1P21796 283 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 CD1BP29016 333 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 KIR2DS2P43631 304 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 ZNF134P52741 427 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 ZNF137PP52743 207 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 IL15RAQ13261 267 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 FOXE3Q13461 319 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 CT45A1Q5HYN5 189 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 GGNBP1Q5YKI7 109 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 FAM71F2Q6NXP2 309 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 TEX38Q6PEX7 206 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 TMEM65Q6PI78 240 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 SLC25A48Q6ZT89 311 aaKnown RBP8.25□□□□□ -1.09
SHMT2-215ENST00000554656 OR2T10Q8NGZ9 312 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 CT45A3Q8NHU0 189 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 CD300LFQ8TDQ1 290 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 LSM10Q969L4 123 aaKnown RBP8.25□□□□□ -1.09
SHMT2-215ENST00000554656 ABHD14BQ96IU4 210 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 ADTRPQ96IZ2 230 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 PRR25Q96S07 402 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 S1PR3Q99500 378 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 IFI27L2Q9H2X8 130 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 SDHAF2Q9NX18 166 aa8.25□□□□□ -1.09
SHMT2-215ENST00000554656 LSM4Q9Y4Z0 139 aaKnown RBP8.25□□□□□ -1.09
SHMT2-215ENST00000554656 SORL1Q92673 2214 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 FAM25EA8MYX2 175 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 RAB29O14966 203 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 ST8SIA5O15466 376 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 MOSP00540 346 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 IGHG4P01861 327 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 SERPINE2P07093 398 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 PSMB6P28072 239 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 CDX1P47902 265 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-215ENST00000554656 FHL3Q13643 280 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 SP6Q3SY56 376 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 CXorf66Q5JRM2 361 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-215ENST00000554656 ASPHD1Q5U4P2 390 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 TMEM268Q5VZI3 342 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 FAM219AQ8IW50 185 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 SELENOHQ8IZQ5 122 aaKnown RBP8.24□□□□□ -1.09
SHMT2-215ENST00000554656 ZBTB8BQ8NAP8 495 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-215ENST00000554656 LHFPL5Q8TAF8 219 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 MYOZ3Q8TDC0 251 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 PPP1R1CQ8WVI7 109 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 OR10C1Q96KK4 312 aa8.24□□□□□ -1.09
SHMT2-215ENST00000554656 C13orf42A0A1B0GVH6 325 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 SMLR1H3BR10 107 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 MPC2O95563 127 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 ELANEP08246 267 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 LYL1P12980 280 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 PSMB8P28062 276 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 DUTP33316 252 aaKnown RBP8.23□□□□□ -1.09
SHMT2-215ENST00000554656 TAGLNQ01995 201 aaKnown RBP8.23□□□□□ -1.09
SHMT2-215ENST00000554656 KIAA0141Q14154 515 aaPredicted RBP8.23□□□□□ -1.09
SHMT2-215ENST00000554656 IAH1Q2TAA2 248 aaPredicted RBP8.23□□□□□ -1.09
SHMT2-215ENST00000554656 NMSQ5H8A3 153 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 LYZL2Q7Z4W2 148 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 SLC35G3Q8N808 338 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 OR11H4Q8NGC9 324 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 OR51H1Q8NH63 302 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 THAP6Q8TBB0 222 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 C4orf3Q8WVX3 66 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 C5orf30Q96GV9 206 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 RNF150Q9ULK6 438 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 PRELID3BQ9Y3B1 194 aa8.23□□□□□ -1.09
SHMT2-215ENST00000554656 TRAV14DV4A0A0A6YYC5 116 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 A0A1B0GU03 582 aa8.22□□□□□ -1.09
SHMT2-215ENST00000554656 SEC14L6B5MCN3 397 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms