RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ITGB1BP1O14713 200 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 IGLV1-47P01700 117 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 FGF2P09038 288 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 SSTR5P35346 364 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 PPP1CCP36873 323 aaKnown RBP9.94□□□□□ -0.82
SHMT2-214ENST00000554604 HABP2Q14520 560 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-214ENST00000554604 LTC4SQ16873 150 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 HLA-DRB5Q30154 266 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 TMEM30BQ3MIR4 351 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 RPL7L1Q6DKI1 246 aaKnown RBP9.94□□□□□ -0.82
SHMT2-214ENST00000554604 OR2C3Q8N628 320 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 C11orf44Q8N8P7 122 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 UBAC2Q8NBM4 344 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 OR9G1Q8NH87 305 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 SLC25A31Q9H0C2 315 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 ZNF702PQ9H963 129 aa9.94□□□□□ -0.82
SHMT2-214ENST00000554604 A0A087X0M5 115 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 BORCS7-ASMTA0A0B4J1R7 106 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 A0A0G2JRQ6 117 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 A0A1B0GX30 115 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 BUB1B-PAK6H3BSN5 160 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 PLXNB1O43157 2135 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 ATG12O94817 140 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 TSPAN15O95858 294 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 CD24P25063 80 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 POLR2GP62487 172 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 VAMP2P63027 116 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 CXorf66Q5JRM2 361 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 TPTE2P1Q5T6R2 138 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 CCDC144NLQ6NUI1 221 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 RFESDQ8TAC1 157 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 FAM110DQ8TAY7 271 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 TMED6Q8WW62 240 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 SAT2Q96F10 170 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 C5orf30Q96GV9 206 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 LYRM2Q9NU23 88 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 COA4Q9NYJ1 87 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 IDI2-AS1Q9NZ38 188 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 GAB2Q9UQC2 676 aa9.93□□□□□ -0.82
SHMT2-214ENST00000554604 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-214ENST00000554604 NUDT19A8MXV4 375 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 OOSP1A8MZH6 123 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 FAM90A26D6RGX4 464 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 WRBO00258 174 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 SHOXO15266 292 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 IGKV1-5P01602 117 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 IGHV3-7P01780 117 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 LPAR6P43657 344 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 AKR1C2P52895 323 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 BLCAPP62952 87 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 EWSR1Q01844 656 aaKnown RBP eCLIP9.92□□□□□ -0.82
SHMT2-214ENST00000554604 BAXQ07812 192 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 MORN2Q502X0 79 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 UTF1Q5T230 341 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 C16orf82Q7Z2V1 217 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 Q8N2B8 174 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 LEAP2Q969E1 77 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 RPEQ96AT9 228 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 RAB40CQ96S21 281 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 AGMATQ9BSE5 352 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 SERTAD4Q9NUC0 356 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 RNF150Q9ULK6 438 aa9.92□□□□□ -0.82
SHMT2-214ENST00000554604 IGHV3-43A0A0B4J1X8 118 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 KRBOX1C9JBD0 128 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 J3QR06 171 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 SSSCA1O60232 199 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 FBXO24O75426 580 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 SEC11BP0C7V7 166 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 P0C879 139 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 IGHV3-43DP0DP04 118 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 ZP3P21754 424 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 VDAC2P45880 294 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-214ENST00000554604 GNG10P50151 68 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 SULT1A2P50226 295 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 LOXL3P58215 753 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
SHMT2-214ENST00000554604 DEFA6Q01524 100 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 FAM53AQ6NSI3 398 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-214ENST00000554604 TMEM252Q8N6L7 170 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 OR10A7Q8NGE5 316 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 OR10X1Q8NGY0 326 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 CFHR4Q92496 578 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 BSCL2Q96G97 398 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-214ENST00000554604 GINS3Q9BRX5 216 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 SLC25A33Q9BSK2 321 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 SMIM3Q9BZL3 60 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 GNG12Q9UBI6 72 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 CACNG5Q9UF02 275 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 PSG11Q9UQ72 335 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 TGP01266 2768 aa9.91□□□□□ -0.82
SHMT2-214ENST00000554604 RAB19A4D1S5 217 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms