RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TMEM177Q53S58 311 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 PDPNQ86YL7 162 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 TCTEX1D1Q8N7M0 179 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 OR2T10Q8NGZ9 312 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 ARPC1AQ92747 370 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 DLX4Q92988 240 aaPredicted RBP12.91□□□□□ -0.34
NEK9-204ENST00000554258 OR5B12Q96R08 314 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 GPHA2Q96T91 129 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 PLSCR3Q9NRY6 295 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 SLC35D1Q9NTN3 355 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 DNAH2Q9P225 4427 aa12.91□□□□□ -0.34
NEK9-204ENST00000554258 I3L521 148 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 TNFSF12O43508 249 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 IGHG4P01861 327 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 APOA2P02652 100 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 PI3P19957 117 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 F2RP25116 425 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 S100GP29377 79 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 KIR2DS2P43631 304 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 PIGPP57054 158 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 GNB1P62873 340 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 CATR1Q13166 79 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 HNF4GQ14541 408 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 PHLDA2Q53GA4 152 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 MZT2BQ6NZ67 158 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 KCTD9Q7L273 389 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 HAPLN4Q86UW8 402 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 RITA1Q96K30 269 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 OR4C12Q96R67 309 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 GNB4Q9HAV0 340 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 C14orf166Q9Y224 244 aaKnown RBP12.9□□□□□ -0.34
NEK9-204ENST00000554258 PRELID3BQ9Y3B1 194 aa12.9□□□□□ -0.34
NEK9-204ENST00000554258 HSPG2P98160 4391 aa12.9□□□□□ -0.35
NEK9-204ENST00000554258 IGKV1-16P04430 117 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 RUNX1Q01196 453 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 DHODHQ02127 395 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 TBC1D26Q86UD7 250 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 CCDC71LQ8N9Z2 235 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 NPBQ8NG41 125 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 OR8H1Q8NGG4 311 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 CD300LFQ8TDQ1 290 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 TCTEX1D2Q8WW35 142 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 TMEM230Q96A57 120 aa12.89□□□□□ -0.35
NEK9-204ENST00000554258 TCRBP04435 133 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 RLN1P04808 185 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 PSMB8P28062 276 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 SLURP1P55000 103 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 DEFA1P59665 94 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 DEFA3P59666 94 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 RTL8BQ17RB0 113 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 ZNF585BQ52M93 769 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 SPAG16Q8N0X2 631 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 ADAD2Q8NCV1 583 aaKnown RBP12.88□□□□□ -0.35
NEK9-204ENST00000554258 FLYWCH2Q96CP2 140 aaKnown RBP12.88□□□□□ -0.35
NEK9-204ENST00000554258 COPZ2Q9P299 210 aa12.88□□□□□ -0.35
NEK9-204ENST00000554258 CRYM-AS1A6NIL9 109 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 SRRM4A7MD48 611 aaKnown RBP12.87□□□□□ -0.35
NEK9-204ENST00000554258 H7C2Y5 167 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 FCGR3BO75015 233 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 B3GALNT1O75752 331 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 NDUFA3O95167 84 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 VDAC1P21796 283 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 LGALS7P47929 136 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 F2RL1P55085 397 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 CEMP1Q6PRD7 247 aaPredicted RBP12.87□□□□□ -0.35
NEK9-204ENST00000554258 SLC25A42Q86VD7 318 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 CADM3Q8N126 398 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 POC5Q8NA72 575 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 OR51H1Q8NH63 302 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 OSR1Q8TAX0 266 aaPredicted RBP12.87□□□□□ -0.35
NEK9-204ENST00000554258 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 UBE2E2Q96LR5 201 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 ALX4Q9H161 411 aaPredicted RBP12.87□□□□□ -0.35
NEK9-204ENST00000554258 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
NEK9-204ENST00000554258 LIN7CQ9NUP9 197 aaKnown RBP12.87□□□□□ -0.35
NEK9-204ENST00000554258 KLK5Q9Y337 293 aaPredicted RBP12.87□□□□□ -0.35
NEK9-204ENST00000554258 DMBT1Q9UGM3 2413 aaPredicted RBP12.86□□□□□ -0.35
NEK9-204ENST00000554258 FAM240BA0A1B0GVZ2 78 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 H0Y980 276 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 HPRT1P00492 218 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 IGLV2-23P01705 113 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 CRYGBP07316 175 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 MECP2P51608 486 aaKnown RBP12.86□□□□□ -0.35
NEK9-204ENST00000554258 UBE2MP61081 183 aaKnown RBP12.86□□□□□ -0.35
NEK9-204ENST00000554258 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
NEK9-204ENST00000554258 CFHR3Q02985 330 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 TMEM128Q5BJH2 165 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 Q8N9W7 124 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 MYOZ3Q8TDC0 251 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 OR51J1Q9H342 316 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 PLEKHA2Q9HB19 425 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 FLVCR2Q9UPI3 526 aa12.86□□□□□ -0.35
NEK9-204ENST00000554258 UBR4Q5T4S7 5183 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 C3orf85A0A1B0GTC6 90 aa12.85□□□□□ -0.35
NEK9-204ENST00000554258 SPDEFO95238 335 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms