RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ACTL6BO94805 426 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 IGLV2-14P01704 120 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 TRBV12-3P01733 135 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 CD74P04233 296 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 IFNA6P05013 189 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 CSN3P07498 182 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 SAA1P0DJI8 122 aaPredicted RBP5.03□□□□□ -1.6
SLIRP-203ENST00000554074 S100GP29377 79 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 MAS1LP35410 378 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 FAUP35544 74 aaKnown RBP5.03□□□□□ -1.6
SLIRP-203ENST00000554074 SYNJ2BPP57105 145 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 TAS2R19P59542 299 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 RHOGP84095 191 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 EIF4EBP1Q13541 118 aaPredicted RBP5.03□□□□□ -1.6
SLIRP-203ENST00000554074 RPEL1Q2QD12 228 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 KLK9Q2XQG4 91 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 CNPY1Q3B7I2 92 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 ZNF66Q6ZN08 573 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 KCTD9Q7L273 389 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 GTSCR1Q86UQ5 136 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 ARRDC1Q8N5I2 433 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 NECAP1Q8NC96 275 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 OR6F1Q8NGZ6 308 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 OR52I2Q8NH67 350 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 OR4S2Q8NH73 311 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 AKIP1Q9NQ31 210 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 KLK9Q9UKQ9 250 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 ELF5Q9UKW6 265 aaPredicted RBP5.03□□□□□ -1.6
SLIRP-203ENST00000554074 ZNF257Q9Y2Q1 563 aa5.03□□□□□ -1.6
SLIRP-203ENST00000554074 IGKV1D-13A0A0B4J2D9 117 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 NPIPB5A8MRT5 1133 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 BMPR1BO00238 502 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 MPPED1O15442 326 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 RBMXL2O75526 392 aaKnown RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 KBTBD11O94819 623 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 HRASP01112 189 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 FGF2P09038 288 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 AKAIN1P0CW23 69 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 IGKV1-13P0DP09 117 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 LYL1P12980 280 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 NFYAP23511 347 aaPredicted RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 KIR2DS2P43631 304 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 UCP3P55916 312 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 HERV-K104P61576 105 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 TSPAN5P62079 268 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 ATP5G2Q06055 141 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 EXOSC2Q13868 293 aaKnown RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 PYDC2Q56P42 97 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 RNASE10Q5GAN6 216 aaKnown RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 IDO2Q6ZQW0 420 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 HAPLN4Q86UW8 402 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 LYSMD2Q8IV50 215 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 PUSL1Q8N0Z8 303 aaKnown RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 GVQW1Q8N7I0 195 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 OR4A5Q8NH83 315 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 TMEM167AQ8TBQ9 72 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 ZNF486Q96H40 463 aaPredicted RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 SCGB3A2Q96PL1 93 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 OR2A7Q96R45 310 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 SPATA25Q9BR10 227 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 C7orf50Q9BRJ6 194 aaKnown RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 CCDC32Q9BV29 185 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 WDR12Q9GZL7 423 aaKnown RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 EDA2RQ9HAV5 297 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 FAM212BQ9NTI7 297 aaPredicted RBP5.02□□□□□ -1.61
SLIRP-203ENST00000554074 EHFQ9NZC4 300 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 V9GYH0 126 aa5.02□□□□□ -1.61
SLIRP-203ENST00000554074 PIGBOS1A0A0B4J2F0 54 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 ANKRD20A5PA0PJZ0 165 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 NAP1L6A6NFF2 107 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 DISC1C4P0D8 188 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 TEX22C9J3V5 150 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 LGALS9O00182 355 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 RBFOX2O43251 390 aaKnown RBP eCLIP5.01□□□□□ -1.61
SLIRP-203ENST00000554074 B3GALNT1O75752 331 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 RAB3DO95716 219 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 PPYP01298 95 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 FCER2P06734 321 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 CRYGCP07315 174 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 ZNF735P0CB33 412 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 APELAP0DMC3 54 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 PTHLHP12272 177 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 HIST1H1BP16401 226 aaKnown RBP5.01□□□□□ -1.61
SLIRP-203ENST00000554074 HLA-DMAP28067 261 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 FCGR2CP31995 323 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 HRH1P35367 487 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 RPL27AP46776 148 aaKnown RBP5.01□□□□□ -1.61
SLIRP-203ENST00000554074 BRWD1-AS2P59051 145 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 RPL30P62888 115 aaKnown RBP5.01□□□□□ -1.61
SLIRP-203ENST00000554074 DEFA5Q01523 94 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 SURF2Q15527 256 aaPredicted RBP5.01□□□□□ -1.61
SLIRP-203ENST00000554074 HAGHQ16775 308 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 C15orf32Q32M92 178 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 C10orf55Q5SWW7 151 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 STEAP1BQ6NZ63 245 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 LINC00322Q6ZN03 302 aaPredicted RBP5.01□□□□□ -1.61
SLIRP-203ENST00000554074 GPHB5Q86YW7 130 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 CMTM1Q8IZ96 169 aa5.01□□□□□ -1.61
SLIRP-203ENST00000554074 SLC38A6Q8IZM9 456 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms